RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 WASHC4Q2M389 1173 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 ANKRD13DQ6ZTN6 518 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 PCMTD1Q96MG8 357 aaPredicted RBP8.4□□□□□ -1.06
SMG6-204ENST00000570606 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.06
SMG6-204ENST00000570606 ISCA1Q9BUE6 129 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 DBNDD1Q9H9R9 158 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 SCN9AQ15858 1988 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 CASP8AP2Q9UKL3 1982 aa8.4□□□□□ -1.06
SMG6-204ENST00000570606 PSME4Q14997 1843 aa8.4□□□□□ -1.07
SMG6-204ENST00000570606 SHTN1A0MZ66 631 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 YDJCA8MPS7 323 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 TRIM6-TRIM34B2RNG4 842 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 H7C1D1 291 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 PSMD14O00487 310 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 IRS4O14654 1257 aaPredicted RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 ECE2O60344 883 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 CALD1Q05682 793 aaKnown RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 CST9Q5W186 159 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 CELF1Q92879 486 aaKnown RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 EYA3Q99504 573 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 MBIPQ9NS73 344 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 CNOT7Q9UIV1 285 aaKnown RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
SMG6-204ENST00000570606 ADAMTS8Q9UP79 889 aa8.39□□□□□ -1.07
SMG6-204ENST00000570606 AOC2O75106 756 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
SMG6-204ENST00000570606 GPSM2P81274 684 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 SF3B3Q15393 1217 aaKnown RBP8.38□□□□□ -1.07
SMG6-204ENST00000570606 TBC1D10BQ4KMP7 808 aaPredicted RBP8.38□□□□□ -1.07
SMG6-204ENST00000570606 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 SAPCD2Q86UD0 394 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 AKAP11Q9UKA4 1901 aa8.38□□□□□ -1.07
SMG6-204ENST00000570606 ELL2O00472 640 aaPredicted RBP8.37□□□□□ -1.07
SMG6-204ENST00000570606 UFL1O94874 794 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 MAP2K2P36507 400 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 HIRAP54198 1017 aaPredicted RBP8.37□□□□□ -1.07
SMG6-204ENST00000570606 GNAI1P63096 354 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 CCDC152Q4G0S7 254 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 ZBTB38Q8NAP3 1195 aaPredicted RBP8.37□□□□□ -1.07
SMG6-204ENST00000570606 TATDN2Q93075 761 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 MYD88Q99836 296 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 PRKRIP1Q9H875 184 aaPredicted RBP8.37□□□□□ -1.07
SMG6-204ENST00000570606 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
SMG6-204ENST00000570606 RTL9Q8NET4 1388 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 APAF1O14727 1248 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 CA12O43570 354 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 DDX58O95786 925 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 RPS12P25398 132 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 HUNKP57058 714 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 RPS8P62241 208 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 TRIM28Q13263 835 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 SAMD7Q7Z3H4 446 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 USP48Q86UV5 1035 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 TBC1D16Q8TBP0 767 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 DPF2Q92785 391 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 HHIPL1Q96JK4 782 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 KCNK17Q96T54 332 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 ZMYND15Q9H091 742 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 PHAXQ9H814 394 aaKnown RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
SMG6-204ENST00000570606 PGAP2Q9UHJ9 254 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
SMG6-204ENST00000570606 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 ADM5C9JUS6 153 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 PDE8AO60658 829 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 PCCAP05165 728 aaPredicted RBP8.35□□□□□ -1.07
SMG6-204ENST00000570606 ZNF853P0CG23 659 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 NOGQ13253 232 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 PROX2Q3B8N5 592 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 CCDC30Q5VVM6 783 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 CCDC191Q8NCU4 936 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 DCPSQ96C86 337 aaKnown RBP8.35□□□□□ -1.07
SMG6-204ENST00000570606 CHMP4AQ9BY43 222 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 GGA3Q9NZ52 723 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
SMG6-204ENST00000570606 XDHP47989 1333 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 PDE4DIPQ5VU43 2346 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 EGFRP00533 1210 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 CD46P15529 392 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 DNAJB2P25686 324 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 FLIIQ13045 1269 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 SULF1Q8IWU6 871 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms