RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 SLC10A4Q96EP9 437 aa26.72■■□□□ 1.87
PKD1-240ENST00000570253 ZBED3Q96IU2 234 aaPredicted RBP26.72■■□□□ 1.87
PKD1-240ENST00000570253 CNNM1Q9NRU3 951 aa26.72■■□□□ 1.87
PKD1-240ENST00000570253 ANP32CO43423 234 aa26.71■■□□□ 1.87
PKD1-240ENST00000570253 INHBEP58166 350 aa26.71■■□□□ 1.87
PKD1-240ENST00000570253 FKBP1AP62942 108 aaKnown RBP26.71■■□□□ 1.87
PKD1-240ENST00000570253 SUPT20HL1Q3ZLR7 823 aa26.71■■□□□ 1.87
PKD1-240ENST00000570253 ECM29Q5VYK3 1845 aa26.7■■□□□ 1.87
PKD1-240ENST00000570253 MANSC4A6NHS7 340 aaPredicted RBP26.7■■□□□ 1.86
PKD1-240ENST00000570253 F8W031 263 aaPredicted RBP26.7■■□□□ 1.86
PKD1-240ENST00000570253 FKTNO75072 461 aa26.7■■□□□ 1.86
PKD1-240ENST00000570253 RBM5P52756 815 aaKnown RBP eCLIP26.7■■□□□ 1.86
PKD1-240ENST00000570253 LDLRAD1Q5T700 205 aa26.7■■□□□ 1.86
PKD1-240ENST00000570253 SPRYD7Q5W111 196 aa26.7■■□□□ 1.86
PKD1-240ENST00000570253 LDHAL6AQ6ZMR3 332 aa26.7■■□□□ 1.86
PKD1-240ENST00000570253 C9orf78Q9NZ63 289 aaPredicted RBP26.7■■□□□ 1.86
PKD1-240ENST00000570253 IL1R1P14778 569 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 FOXO4P98177 505 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 CFAP100Q494V2 611 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 BEND3Q5T5X7 828 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 PDE4DIPQ5VU43 2346 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 LMBR1LQ6UX01 489 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 CFHR5Q9BXR6 569 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 VEZTQ9HBM0 779 aa26.69■■□□□ 1.86
PKD1-240ENST00000570253 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.69■■□□□ 1.86
PKD1-240ENST00000570253 UNCXA6NJT0 531 aa26.68■■□□□ 1.86
PKD1-240ENST00000570253 F6X3S4 739 aa26.68■■□□□ 1.86
PKD1-240ENST00000570253 GRM8O00222 908 aa26.68■■□□□ 1.86
PKD1-240ENST00000570253 PLIN1O60240 522 aa26.68■■□□□ 1.86
PKD1-240ENST00000570253 FBXO46Q6PJ61 603 aaPredicted RBP26.68■■□□□ 1.86
PKD1-240ENST00000570253 ZBTB48P10074 688 aaPredicted RBP26.67■■□□□ 1.86
PKD1-240ENST00000570253 A0A1B0GUL6 1792 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 SPDYE2BA6NHP3 402 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 SNAP23O00161 211 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 SPDYE6P0CI01 402 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 IREB2P48200 963 aaKnown RBP26.66■■□□□ 1.86
PKD1-240ENST00000570253 MAP3K11Q16584 847 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 OTUD7BQ6GQQ9 843 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 CERS5Q8N5B7 392 aa26.66■■□□□ 1.86
PKD1-240ENST00000570253 CLRN2A0PK11 232 aa26.65■■□□□ 1.86
PKD1-240ENST00000570253 TNFAIP1Q13829 316 aa26.65■■□□□ 1.86
PKD1-240ENST00000570253 IRS2Q9Y4H2 1338 aa26.65■■□□□ 1.86
PKD1-240ENST00000570253 ALDH1L1O75891 902 aa26.64■■□□□ 1.86
PKD1-240ENST00000570253 SLC4A10Q6U841 1118 aa26.63■■□□□ 1.85
PKD1-240ENST00000570253 SRCIN1Q9C0H9 1055 aa26.63■■□□□ 1.85
PKD1-240ENST00000570253 TNRC18O15417 2968 aaPredicted RBP26.62■■□□□ 1.85
PKD1-240ENST00000570253 UBE4AQ14139 1066 aa26.62■■□□□ 1.85
PKD1-240ENST00000570253 IFNL1Q8IU54 200 aa26.62■■□□□ 1.85
PKD1-240ENST00000570253 WNK4Q96J92 1243 aa26.62■■□□□ 1.85
PKD1-240ENST00000570253 ZNF594Q96JF6 807 aaPredicted RBP26.62■■□□□ 1.85
PKD1-240ENST00000570253 FZD1Q9UP38 647 aa26.62■■□□□ 1.85
PKD1-240ENST00000570253 JAG2Q9Y219 1238 aa26.62■■□□□ 1.85
PKD1-240ENST00000570253 PRMT6Q96LA8 375 aaPredicted RBP26.61■■□□□ 1.85
PKD1-240ENST00000570253 HIBADHP31937 336 aaKnown RBP26.6■■□□□ 1.85
PKD1-240ENST00000570253 MFSD14BQ5SR56 506 aa26.6■■□□□ 1.85
PKD1-240ENST00000570253 PRPF38BQ5VTL8 546 aaKnown RBP26.6■■□□□ 1.85
PKD1-240ENST00000570253 ANKRD13AQ8IZ07 590 aa26.6■■□□□ 1.85
PKD1-240ENST00000570253 RASA3Q14644 834 aa26.59■■□□□ 1.85
PKD1-240ENST00000570253 VPS37DQ86XT2 251 aa26.59■■□□□ 1.85
PKD1-240ENST00000570253 SERPINA10Q9UK55 444 aa26.59■■□□□ 1.85
PKD1-240ENST00000570253 TTF2Q9UNY4 1162 aaKnown RBP26.59■■□□□ 1.85
PKD1-240ENST00000570253 FAM205AQ6ZU69 1335 aa26.59■■□□□ 1.85
PKD1-240ENST00000570253 TNNI2P48788 182 aa26.58■■□□□ 1.85
PKD1-240ENST00000570253 EPHA10Q5JZY3 1008 aa26.58■■□□□ 1.85
PKD1-240ENST00000570253 NBPF12Q5TAG4 269 aaPredicted RBP26.58■■□□□ 1.85
PKD1-240ENST00000570253 CLMNQ96JQ2 1002 aa26.58■■□□□ 1.85
PKD1-240ENST00000570253 TRIM17Q9Y577 477 aa26.58■■□□□ 1.85
PKD1-240ENST00000570253 PCDHAC2Q9Y5I4 1007 aa26.58■■□□□ 1.85
PKD1-240ENST00000570253 ERO1AQ96HE7 468 aa26.57■■□□□ 1.84
PKD1-240ENST00000570253 SSC5DA1L4H1 1573 aa26.57■■□□□ 1.84
PKD1-240ENST00000570253 MROH5Q6ZUA9 1318 aa26.57■■□□□ 1.84
PKD1-240ENST00000570253 FRAT2O75474 233 aaPredicted RBP26.56■■□□□ 1.84
PKD1-240ENST00000570253 TDRD7Q8NHU6 1098 aaKnown RBP26.56■■□□□ 1.84
PKD1-240ENST00000570253 GYG1P46976 350 aa26.55■■□□□ 1.84
PKD1-240ENST00000570253 R3HDMLQ9H3Y0 253 aa26.55■■□□□ 1.84
PKD1-240ENST00000570253 ZNF70Q9UC06 446 aaPredicted RBP26.55■■□□□ 1.84
PKD1-240ENST00000570253 USP2O75604 605 aaPredicted RBP26.54■■□□□ 1.84
PKD1-240ENST00000570253 SPDYE2Q495Y8 402 aa26.54■■□□□ 1.84
PKD1-240ENST00000570253 CAVIN4Q5BKX8 364 aa26.54■■□□□ 1.84
PKD1-240ENST00000570253 INTS3Q68E01 1043 aaKnown RBP26.54■■□□□ 1.84
PKD1-240ENST00000570253 LAMB1P07942 1786 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 IGF2BP3O00425 579 aaKnown RBP eCLIP26.53■■□□□ 1.84
PKD1-240ENST00000570253 FAM9BQ8IZU0 186 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 TBC1D22AQ8WUA7 517 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 SUCLG2Q96I99 432 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 TDRD3Q9H7E2 651 aaKnown RBP26.53■■□□□ 1.84
PKD1-240ENST00000570253 PCDH10Q9P2E7 1040 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 ARAP2Q8WZ64 1704 aa26.53■■□□□ 1.84
PKD1-240ENST00000570253 DZIP1LQ8IYY4 767 aaKnown RBP26.52■■□□□ 1.84
PKD1-240ENST00000570253 FAM84BQ96KN1 310 aaPredicted RBP26.52■■□□□ 1.84
PKD1-240ENST00000570253 SPINK5Q9NQ38 1064 aaPredicted RBP26.52■■□□□ 1.84
PKD1-240ENST00000570253 WDHD1O75717 1129 aaPredicted RBP26.51■■□□□ 1.83
PKD1-240ENST00000570253 CRKP46108 304 aa26.51■■□□□ 1.83
PKD1-240ENST00000570253 ARHGEF6Q15052 776 aa26.51■■□□□ 1.83
PKD1-240ENST00000570253 OTOP1Q7RTM1 612 aa26.51■■□□□ 1.83
PKD1-240ENST00000570253 ELP3Q9H9T3 547 aa26.51■■□□□ 1.83
PKD1-240ENST00000570253 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
PKD1-240ENST00000570253 METTL24Q5JXM2 366 aa26.5■■□□□ 1.83
PKD1-240ENST00000570253 OPTNQ96CV9 577 aa26.5■■□□□ 1.83
PKD1-240ENST00000570253 TMOD2Q9NZR1 351 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms