RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	CLRN2	A0PK11	232 aa		14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	CSF1R	P07333	972 aa		14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	WNK4	Q96J92	1243 aa		14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	JAG2	Q9Y219	1238 aa		14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	SSC5D	A1L4H1	1573 aa		14.07	□□□□□ -0.16
CMC2-223	ENST00000570195	COL1A1	P02452	1464 aa	Predicted RBP	14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	ANKRD18B	A2A2Z9	1011 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	PPP1R12B	O60237	982 aa	Predicted RBP	14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	INHBE	P58166	350 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	FLII	Q13045	1269 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	MAP3K11	Q16584	847 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	CFAP100	Q494V2	611 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	OTOP1	Q7RTM1	612 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	MYH16	Q9H6N6	1097 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	VEZT	Q9HBM0	779 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	AOX1	Q06278	1338 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	IRS2	Q9Y4H2	1338 aa		14.06	□□□□□ -0.16
CMC2-223	ENST00000570195	POTEF	A5A3E0	1075 aa		14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	ZBTB48	P10074	688 aa	Predicted RBP	14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	FKBP5	Q13451	457 aa	Predicted RBP	14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	NBPF12	Q5TAG4	269 aa	Predicted RBP	14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	MTMR14	Q8NCE2	650 aa		14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	DNAAF4	Q8WXU2	420 aa		14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	PRMT6	Q96LA8	375 aa	Predicted RBP	14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	CHMP3	Q9Y3E7	222 aa		14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	PPP2R3B	Q9Y5P8	575 aa		14.05	□□□□□ -0.16
CMC2-223	ENST00000570195	SPDYE2B	A6NHP3	402 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	MYO1B	O43795	1136 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	SPDYE6	P0CI01	402 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	SUPT20HL1	Q3ZLR7	823 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	ZNF804A	Q7Z570	1209 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	LINS1	Q8NG48	757 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	CD99L2	Q8TCZ2	262 aa		14.04	□□□□□ -0.16
CMC2-223	ENST00000570195	PLIN1	O60240	522 aa		14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	USP2	O75604	605 aa	Predicted RBP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	NPM3	O75607	178 aa	Known RBP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	IL1R1	P14778	569 aa		14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	GJA5	P36382	358 aa		14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	IREB2	P48200	963 aa	Known RBP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	RBM5	P52756	815 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	CRHR2	Q13324	411 aa		14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	IFIT5	Q13325	482 aa	Known RBP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	C15orf52	Q6ZUT6	534 aa	Known RBP	14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	WWC1	Q8IX03	1113 aa		14.03	□□□□□ -0.16
CMC2-223	ENST00000570195	FOXO4	P98177	505 aa		14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	RASA3	Q14644	834 aa		14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	CCDC184	Q52MB2	194 aa		14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	ERO1A	Q96HE7	468 aa		14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	ZNF594	Q96JF6	807 aa	Predicted RBP	14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	PTPN22	Q9Y2R2	807 aa		14.02	□□□□□ -0.17
CMC2-223	ENST00000570195	HTT	P42858	3142 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	KCNA4	P22459	653 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	FKBP1A	P62942	108 aa	Known RBP	14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	CCDC27	Q2M243	656 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	INTS3	Q68E01	1043 aa	Known RBP	14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	OTUD7B	Q6GQQ9	843 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	ANKRD13A	Q8IZ07	590 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	GCC1	Q96CN9	775 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	PTPN18	Q99952	460 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	ELP3	Q9H9T3	547 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	EFCC1	Q9HA90	598 aa		14.01	□□□□□ -0.17
CMC2-223	ENST00000570195	ECM29	Q5VYK3	1845 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195	UNCX	A6NJT0	531 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195		F6X3S4	739 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195	CAP1	Q01518	475 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195	EPHA10	Q5JZY3	1008 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195	LMBR1L	Q6UX01	489 aa		14	□□□□□ -0.17
CMC2-223	ENST00000570195	KIAA0100	Q14667	2235 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	MKI67	P46013	3256 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	FANCI	Q9NVI1	1328 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	EN2	P19622	333 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	SP3	Q02447	781 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	TAF7L	Q5H9L4	462 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	HABP4	Q5JVS0	413 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	LDHAL6A	Q6ZMR3	332 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	CDAN1	Q8IWY9	1227 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	OPTN	Q96CV9	577 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	TDRD3	Q9H7E2	651 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	CNNM1	Q9NRU3	951 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	ZNF70	Q9UC06	446 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-223	ENST00000570195		A0A1B0GUL6	1792 aa		13.99	□□□□□ -0.17
CMC2-223	ENST00000570195	IL16	Q14005	1332 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	TESPA1	A2RU30	521 aa	Predicted RBP	13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	VAMP4	O75379	141 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	CCDC57	Q2TAC2	916 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	SPDYE2	Q495Y8	402 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	MFSD14B	Q5SR56	506 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	BEND3	Q5T5X7	828 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	ARMC5	Q96C12	935 aa		13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	TTF2	Q9UNY4	1162 aa	Known RBP	13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	SALL2	Q9Y467	1007 aa	Predicted RBP	13.98	□□□□□ -0.17
CMC2-223	ENST00000570195	FAM205A	Q6ZU69	1335 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	CENPF	P49454	3210 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	TCP10L2	B9ZVM9	353 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	GYG1	P46976	350 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	EXOSC9	Q06265	439 aa	Known RBP	13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	TNFAIP1	Q13829	316 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	TDRD7	Q8NHU6	1098 aa	Known RBP	13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	BRI3BP	Q8WY22	251 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms