RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
LINC00556-201ENST00000569603 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
LINC00556-201ENST00000569603 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
LINC00556-201ENST00000569603 POLD1P28340 1107 aa8.4□□□□□ -1.06
LINC00556-201ENST00000569603 RNF144AP50876 292 aaPredicted RBP8.4□□□□□ -1.06
LINC00556-201ENST00000569603 ITPK1Q13572 414 aa8.4□□□□□ -1.06
LINC00556-201ENST00000569603 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.06
LINC00556-201ENST00000569603 ZNF837Q96EG3 531 aaPredicted RBP8.4□□□□□ -1.06
LINC00556-201ENST00000569603 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
LINC00556-201ENST00000569603 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
LINC00556-201ENST00000569603 ADAMTS7Q9UKP4 1686 aa8.4□□□□□ -1.07
LINC00556-201ENST00000569603 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 ZBBXA8MT70 800 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 NEFLP07196 543 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 SIK1P57059 783 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
LINC00556-201ENST00000569603 SMIM5Q71RC9 77 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 PANK3Q9H999 370 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 ATG3Q9NT62 314 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 CD2APQ9Y5K6 639 aa8.39□□□□□ -1.07
LINC00556-201ENST00000569603 SCN11AQ9UI33 1791 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 ADCY9O60503 1353 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 GPR25O00155 361 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 MEN1O00255 615 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 PPM1GO15355 546 aaPredicted RBP8.38□□□□□ -1.07
LINC00556-201ENST00000569603 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00556-201ENST00000569603 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 IFNL2Q8IZJ0 200 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 FLAD1Q8NFF5 587 aa8.38□□□□□ -1.07
LINC00556-201ENST00000569603 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
LINC00556-201ENST00000569603 TJP1Q07157 1748 aa8.37□□□□□ -1.07
LINC00556-201ENST00000569603 CELA2BP08218 269 aaPredicted RBP8.37□□□□□ -1.07
LINC00556-201ENST00000569603 SSFA2P28290 1259 aa8.37□□□□□ -1.07
LINC00556-201ENST00000569603 MARSP56192 900 aaKnown RBP8.37□□□□□ -1.07
LINC00556-201ENST00000569603 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
LINC00556-201ENST00000569603 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
LINC00556-201ENST00000569603 ARID3AQ99856 593 aa8.37□□□□□ -1.07
LINC00556-201ENST00000569603 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
LINC00556-201ENST00000569603 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
LINC00556-201ENST00000569603 A0A1W2PRU2 124 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 ERVV-2B6SEH9 535 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 IGHA1P01876 353 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 HMGB2P26583 209 aaKnown RBP8.36□□□□□ -1.07
LINC00556-201ENST00000569603 IL13P35225 146 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 TNNT2P45379 298 aaPredicted RBP8.36□□□□□ -1.07
LINC00556-201ENST00000569603 SCTRP47872 440 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 GPR162Q16538 588 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
LINC00556-201ENST00000569603 TMOD3Q9NYL9 352 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 DNMT3AQ9Y6K1 912 aaPredicted RBP8.36□□□□□ -1.07
LINC00556-201ENST00000569603 MRC1P22897 1456 aa8.36□□□□□ -1.07
LINC00556-201ENST00000569603 COL3A1P02461 1466 aaPredicted RBP8.35□□□□□ -1.07
LINC00556-201ENST00000569603 GPC1P35052 558 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 DBN1Q16643 649 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 GPAT2Q6NUI2 795 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
LINC00556-201ENST00000569603 KIF7Q2M1P5 1343 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 CNTNAP4Q9C0A0 1308 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 PXDNLA1KZ92 1463 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 GPR37L1O60883 481 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 RIPOR1Q6ZS17 1223 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 C10orf71Q711Q0 1435 aa8.34□□□□□ -1.07
LINC00556-201ENST00000569603 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
LINC00556-201ENST00000569603 UBR2Q8IWV8 1755 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 C1QTNF8P60827 252 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 POU4F2Q12837 409 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 KANK3Q6NY19 840 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
LINC00556-201ENST00000569603 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 KCPQ6ZWJ8 1503 aa8.33□□□□□ -1.08
LINC00556-201ENST00000569603 HSP90AB1P08238 724 aaKnown RBP8.32□□□□□ -1.08
LINC00556-201ENST00000569603 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
LINC00556-201ENST00000569603 FOXK2Q01167 660 aa8.32□□□□□ -1.08
LINC00556-201ENST00000569603 PLEKHO1Q53GL0 409 aaPredicted RBP8.32□□□□□ -1.08
LINC00556-201ENST00000569603 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
LINC00556-201ENST00000569603 GTPBP3Q969Y2 492 aaKnown RBP8.32□□□□□ -1.08
LINC00556-201ENST00000569603 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
LINC00556-201ENST00000569603 NPC1L1Q9UHC9 1359 aa8.32□□□□□ -1.08
LINC00556-201ENST00000569603 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 SIPA1L3O60292 1781 aaPredicted RBP8.31□□□□□ -1.08
LINC00556-201ENST00000569603 RPS6KA4O75676 772 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 MMP10P09238 476 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 GYS1P13807 737 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 CLN3Q13286 438 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms