RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 KCNF1Q9H3M0 494 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 NDUFA8P51970 172 aa23.67■■□□□ 1.38
SCRT1-201ENST00000569446 ASAP1Q9ULH1 1129 aa23.67■■□□□ 1.38
SCRT1-201ENST00000569446 RANBP6O60518 1105 aaKnown RBP23.67■■□□□ 1.38
SCRT1-201ENST00000569446 MAST3O60307 1309 aa23.67■■□□□ 1.38
SCRT1-201ENST00000569446 PCDHA7Q9UN72 937 aa23.67■■□□□ 1.38
SCRT1-201ENST00000569446 CTDSPL2Q05D32 466 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 PUS7LQ9H0K6 701 aaKnown RBP23.66■■□□□ 1.38
SCRT1-201ENST00000569446 PRDM1O75626 825 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 ITGA6P23229 1130 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 FAM160A1Q05DH4 1040 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 CLIC6Q96NY7 704 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 AFMP43652 599 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 SYT10Q6XYQ8 523 aa23.66■■□□□ 1.38
SCRT1-201ENST00000569446 SCARF1Q14162 830 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 CCDC144BQ3MJ40 725 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 KIF18AQ8NI77 898 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 UBAC1Q9BSL1 405 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 STX17P56962 302 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 TRIM22Q8IYM9 498 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 DNAI1Q9UI46 699 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 DENND2AQ9ULE3 1009 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 KCNJ14Q9UNX9 436 aa23.65■■□□□ 1.38
SCRT1-201ENST00000569446 SART3Q15020 963 aaKnown RBP23.64■■□□□ 1.38
SCRT1-201ENST00000569446 MAGEB6Q8N7X4 407 aa23.64■■□□□ 1.38
SCRT1-201ENST00000569446 GOLPH3LQ9H4A5 285 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 ZBTB43O43298 467 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 DPCR1Q3MIW9 517 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 NBPF14Q5TI25 921 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
SCRT1-201ENST00000569446 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
SCRT1-201ENST00000569446 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
SCRT1-201ENST00000569446 RESTQ13127 1097 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 SNW1Q13573 536 aaKnown RBP23.63■■□□□ 1.37
SCRT1-201ENST00000569446 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 JMYQ8N9B5 988 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 STAMQ92783 540 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 CTAGE5O15320 804 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 UBASH3AP57075 661 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 ARMT1Q9H993 441 aa23.63■■□□□ 1.37
SCRT1-201ENST00000569446 TMEM87AQ8NBN3 555 aa23.62■■□□□ 1.37
SCRT1-201ENST00000569446 XPO4Q9C0E2 1151 aaKnown RBP23.62■■□□□ 1.37
SCRT1-201ENST00000569446 VIRMAQ69YN4 1812 aaKnown RBP23.62■■□□□ 1.37
SCRT1-201ENST00000569446 ZNF202O95125 648 aa23.62■■□□□ 1.37
SCRT1-201ENST00000569446 POLR3GO15318 223 aaPredicted RBP23.61■■□□□ 1.37
SCRT1-201ENST00000569446 COBLO75128 1261 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 TOP1P11387 765 aaKnown RBP23.61■■□□□ 1.37
SCRT1-201ENST00000569446 CCDC94Q9BW85 323 aaPredicted RBP23.61■■□□□ 1.37
SCRT1-201ENST00000569446 USP27XA6NNY8 438 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 GREM2Q9H772 168 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 KNDC1Q76NI1 1749 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 IL2RBP14784 551 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 DHX8Q14562 1220 aaKnown RBP23.61■■□□□ 1.37
SCRT1-201ENST00000569446 TRMT44Q8IYL2 757 aaKnown RBP23.61■■□□□ 1.37
SCRT1-201ENST00000569446 HELLSQ9NRZ9 838 aa23.61■■□□□ 1.37
SCRT1-201ENST00000569446 PFKFB2O60825 505 aa23.6■■□□□ 1.37
SCRT1-201ENST00000569446 MBD4O95243 580 aa23.6■■□□□ 1.37
SCRT1-201ENST00000569446 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
SCRT1-201ENST00000569446 PCMTD1Q96MG8 357 aaPredicted RBP23.6■■□□□ 1.37
SCRT1-201ENST00000569446 EPB41L2O43491 1005 aaKnown RBP23.6■■□□□ 1.37
SCRT1-201ENST00000569446 PNOCQ13519 176 aa23.6■■□□□ 1.37
SCRT1-201ENST00000569446 CEMIPQ8WUJ3 1361 aa23.59■■□□□ 1.37
SCRT1-201ENST00000569446 KCNQ4P56696 695 aa23.59■■□□□ 1.37
SCRT1-201ENST00000569446 UTP14AQ9BVJ6 771 aaKnown RBP23.59■■□□□ 1.37
SCRT1-201ENST00000569446 NACAP1Q9BZK3 213 aa23.59■■□□□ 1.37
SCRT1-201ENST00000569446 RICTORQ6R327 1708 aa23.59■■□□□ 1.37
SCRT1-201ENST00000569446 PDIA4P13667 645 aaKnown RBP23.59■■□□□ 1.37
SCRT1-201ENST00000569446 ELF2Q15723 593 aa23.59■■□□□ 1.37
SCRT1-201ENST00000569446 MAP3K12Q12852 859 aa23.58■■□□□ 1.37
SCRT1-201ENST00000569446 SLC4A4Q9Y6R1 1079 aa23.58■■□□□ 1.37
SCRT1-201ENST00000569446 ZNF532Q9HCE3 1301 aa23.58■■□□□ 1.37
SCRT1-201ENST00000569446 SSRP1Q08945 709 aaKnown RBP23.58■■□□□ 1.37
SCRT1-201ENST00000569446 KCNG4Q8TDN1 519 aa23.58■■□□□ 1.37
SCRT1-201ENST00000569446 ZNF215Q9UL58 517 aaPredicted RBP23.58■■□□□ 1.37
SCRT1-201ENST00000569446 PHKA1P46020 1223 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 CDKL5O76039 1030 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 TEX35Q5T0J7 233 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 ANO1Q5XXA6 986 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 CCDC191Q8NCU4 936 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 DLG5Q8TDM6 1919 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 ZNF609O15014 1411 aa23.57■■□□□ 1.36
SCRT1-201ENST00000569446 MYSM1Q5VVJ2 828 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 GPIHBP1Q8IV16 184 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 UBXN4Q92575 508 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 RNF216Q9NWF9 866 aaPredicted RBP23.56■■□□□ 1.36
SCRT1-201ENST00000569446 TECPR2O15040 1411 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 UBE2Q2LH0YL09 131 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 ZMYM1Q5SVZ6 1142 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 HOOK1Q9UJC3 728 aaKnown RBP23.56■■□□□ 1.36
SCRT1-201ENST00000569446 PXDNQ92626 1479 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 ATP1A3P13637 1013 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 KARSQ15046 597 aaKnown RBP23.56■■□□□ 1.36
SCRT1-201ENST00000569446 KRT40Q6A162 431 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 APPBP2Q92624 585 aa23.56■■□□□ 1.36
SCRT1-201ENST00000569446 A0A0U1RQG5 324 aaPredicted RBP23.55■■□□□ 1.36
SCRT1-201ENST00000569446 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 CCDC34Q96HJ3 373 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 ZFP91Q96JP5 570 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms