RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 PUM3Q15397 648 aaKnown RBP21.87■■□□□ 1.09
EDC3-215ENST00000569007 PAXIP1Q6ZW49 1069 aaPredicted RBP21.87■■□□□ 1.09
EDC3-215ENST00000569007 FBXO33Q7Z6M2 555 aa21.87■■□□□ 1.09
EDC3-215ENST00000569007 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
EDC3-215ENST00000569007 PITPNM2Q9BZ72 1349 aa21.86■■□□□ 1.09
EDC3-215ENST00000569007 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
EDC3-215ENST00000569007 HSPA1AP0DMV8 641 aaKnown RBP21.86■■□□□ 1.09
EDC3-215ENST00000569007 HSPA1BP0DMV9 641 aaKnown RBP21.86■■□□□ 1.09
EDC3-215ENST00000569007 FGFR2P21802 821 aa21.86■■□□□ 1.09
EDC3-215ENST00000569007 FKBP1AP62942 108 aaKnown RBP21.86■■□□□ 1.09
EDC3-215ENST00000569007 VPS37DQ86XT2 251 aa21.86■■□□□ 1.09
EDC3-215ENST00000569007 FBXO3Q9UK99 471 aa21.86■■□□□ 1.09
EDC3-215ENST00000569007 PA2G4Q9UQ80 394 aaKnown RBP21.86■■□□□ 1.09
EDC3-215ENST00000569007 F8W031 263 aaPredicted RBP21.85■■□□□ 1.09
EDC3-215ENST00000569007 CIAO1O76071 339 aa21.85■■□□□ 1.09
EDC3-215ENST00000569007 CAVIN4Q5BKX8 364 aa21.85■■□□□ 1.09
EDC3-215ENST00000569007 CYP4F22Q6NT55 531 aa21.85■■□□□ 1.09
EDC3-215ENST00000569007 CDCA5Q96FF9 252 aa21.85■■□□□ 1.09
EDC3-215ENST00000569007 CAPNS2Q96L46 248 aa21.85■■□□□ 1.09
EDC3-215ENST00000569007 SCAF8Q9UPN6 1271 aaKnown RBP21.85■■□□□ 1.09
EDC3-215ENST00000569007 IQSEC3Q9UPP2 1182 aaPredicted RBP21.85■■□□□ 1.09
EDC3-215ENST00000569007 GNAI2P04899 355 aa21.84■■□□□ 1.09
EDC3-215ENST00000569007 IFIT1P09914 478 aaKnown RBP21.84■■□□□ 1.09
EDC3-215ENST00000569007 GRM1Q13255 1194 aa21.84■■□□□ 1.09
EDC3-215ENST00000569007 ZBED3Q96IU2 234 aaPredicted RBP21.84■■□□□ 1.09
EDC3-215ENST00000569007 COPRSQ9NQ92 184 aa21.84■■□□□ 1.09
EDC3-215ENST00000569007 SRGAP3O43295 1099 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 ECE1P42892 770 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 BCAMP50895 628 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 MTX1Q13505 466 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 DLGAP5Q15398 846 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 MFSD14BQ5SR56 506 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 FTSJ3Q8IY81 847 aaKnown RBP21.83■■□□□ 1.09
EDC3-215ENST00000569007 LPIN2Q92539 896 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 GBA2Q9HCG7 927 aaPredicted RBP21.83■■□□□ 1.09
EDC3-215ENST00000569007 CEP126Q9P2H0 1117 aa21.83■■□□□ 1.09
EDC3-215ENST00000569007 SLC5A1P13866 664 aa21.82■■□□□ 1.08
EDC3-215ENST00000569007 IL15P40933 162 aaPredicted RBP21.82■■□□□ 1.08
EDC3-215ENST00000569007 HUNKP57058 714 aa21.82■■□□□ 1.08
EDC3-215ENST00000569007 HHIPL1Q96JK4 782 aa21.82■■□□□ 1.08
EDC3-215ENST00000569007 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
EDC3-215ENST00000569007 RLBP1P12271 317 aa21.81■■□□□ 1.08
EDC3-215ENST00000569007 CHAF1AQ13111 956 aaPredicted RBP21.81■■□□□ 1.08
EDC3-215ENST00000569007 CFAP100Q494V2 611 aa21.81■■□□□ 1.08
EDC3-215ENST00000569007 DZIP1LQ8IYY4 767 aaKnown RBP21.81■■□□□ 1.08
EDC3-215ENST00000569007 C2orf69Q8N8R5 385 aa21.81■■□□□ 1.08
EDC3-215ENST00000569007 MTMR14Q8NCE2 650 aa21.81■■□□□ 1.08
EDC3-215ENST00000569007 PCDHAC2Q9Y5I4 1007 aa21.81■■□□□ 1.08
EDC3-215ENST00000569007 ATP2B3Q16720 1220 aa21.8■■□□□ 1.08
EDC3-215ENST00000569007 PRAMEF18Q5VWM3 479 aa21.8■■□□□ 1.08
EDC3-215ENST00000569007 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
EDC3-215ENST00000569007 TTF2Q9UNY4 1162 aaKnown RBP21.79■■□□□ 1.08
EDC3-215ENST00000569007 SPDYE2BA6NHP3 402 aa21.78■■□□□ 1.08
EDC3-215ENST00000569007 SPDYE6P0CI01 402 aa21.78■■□□□ 1.08
EDC3-215ENST00000569007 GRIK5Q16478 980 aa21.78■■□□□ 1.08
EDC3-215ENST00000569007 APOBEC3FQ8IUX4 373 aaKnown RBP21.78■■□□□ 1.08
EDC3-215ENST00000569007 PRMT6Q96LA8 375 aaPredicted RBP21.78■■□□□ 1.08
EDC3-215ENST00000569007 WBP1LQ9NX94 342 aa21.78■■□□□ 1.08
EDC3-215ENST00000569007 PNMA6EA0A0J9YXQ4 647 aa21.77■■□□□ 1.08
EDC3-215ENST00000569007 AOC2O75106 756 aa21.77■■□□□ 1.08
EDC3-215ENST00000569007 RBM5P52756 815 aaKnown RBP eCLIP21.77■■□□□ 1.08
EDC3-215ENST00000569007 TBC1D22AQ8WUA7 517 aa21.77■■□□□ 1.08
EDC3-215ENST00000569007 AOX1Q06278 1338 aa21.77■■□□□ 1.07
EDC3-215ENST00000569007 MAP2K1Q02750 393 aaPredicted RBP21.76■■□□□ 1.07
EDC3-215ENST00000569007 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
EDC3-215ENST00000569007 SERPINA10Q9UK55 444 aa21.76■■□□□ 1.07
EDC3-215ENST00000569007 THSD7BQ9C0I4 1608 aa21.76■■□□□ 1.07
EDC3-215ENST00000569007 ARAP2Q8WZ64 1704 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 CLRN2A0PK11 232 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 FOXN1O15353 648 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 MYO1BO43795 1136 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 MAP2K2P36507 400 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 RGMBQ6NW40 437 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 PANK1Q8TE04 598 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 C1orf115Q9H7X2 142 aa21.75■■□□□ 1.07
EDC3-215ENST00000569007 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
EDC3-215ENST00000569007 ADORA1P30542 326 aa21.74■■□□□ 1.07
EDC3-215ENST00000569007 FKBP1BP68106 108 aa21.74■■□□□ 1.07
EDC3-215ENST00000569007 TFCP2Q12800 502 aa21.74■■□□□ 1.07
EDC3-215ENST00000569007 DEFB129Q9H1M3 183 aa21.74■■□□□ 1.07
EDC3-215ENST00000569007 PHKA1P46020 1223 aa21.73■■□□□ 1.07
EDC3-215ENST00000569007 CRKP46108 304 aa21.73■■□□□ 1.07
EDC3-215ENST00000569007 ZNF157P51786 506 aaPredicted RBP21.73■■□□□ 1.07
EDC3-215ENST00000569007 MOB2Q70IA6 237 aa21.73■■□□□ 1.07
EDC3-215ENST00000569007 VEZTQ9HBM0 779 aa21.73■■□□□ 1.07
EDC3-215ENST00000569007 GNL3LQ9NVN8 582 aaKnown RBP21.73■■□□□ 1.07
EDC3-215ENST00000569007 COL1A1P02452 1464 aaPredicted RBP21.72■■□□□ 1.07
EDC3-215ENST00000569007 PAPPA2Q9BXP8 1791 aa21.72■■□□□ 1.07
EDC3-215ENST00000569007 NF2P35240 595 aa21.72■■□□□ 1.07
EDC3-215ENST00000569007 TIMM10P62072 90 aa21.72■■□□□ 1.07
EDC3-215ENST00000569007 COL13A1Q5TAT6 717 aaPredicted RBP21.72■■□□□ 1.07
EDC3-215ENST00000569007 RCAN3Q9UKA8 241 aa21.72■■□□□ 1.07
EDC3-215ENST00000569007 FAM155AB1AL88 458 aaPredicted RBP21.71■■□□□ 1.07
EDC3-215ENST00000569007 UBE2Q2LH0YL09 131 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 NOGQ13253 232 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 G3BP1Q13283 466 aaKnown RBP eCLIP21.71■■□□□ 1.07
EDC3-215ENST00000569007 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
EDC3-215ENST00000569007 POLA2Q14181 598 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 WDR66Q8TBY9 1149 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms