RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	CEP126	Q9P2H0	1117 aa		12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	LRRFIP2	Q9Y608	721 aa	Known RBP	12.91	□□□□□ -0.34
UBR1-207	ENST00000568782	MYH13	Q9UKX3	1938 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782		F8W031	263 aa	Predicted RBP	12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	GYG1	P46976	350 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	HUNK	P57058	714 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	SAPCD2	Q86UD0	394 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	KLHDC4	Q8TBB5	520 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	TBC1D22A	Q8WUA7	517 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	CLUAP1	Q96AJ1	413 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	MXD3	Q9BW11	206 aa		12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	GNL3L	Q9NVN8	582 aa	Known RBP	12.9	□□□□□ -0.34
UBR1-207	ENST00000568782	ADM5	C9JUS6	153 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	WNT10B	O00744	389 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	GNAI2	P04899	355 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	MS4A1	P11836	297 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	TRIM27	P14373	513 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	MAP2K2	P36507	400 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	TTLL12	Q14166	644 aa	Predicted RBP	12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	NBPF9	Q3BBW0	867 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	MFSD14B	Q5SR56	506 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	CYP4F22	Q6NT55	531 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	TDRD7	Q8NHU6	1098 aa	Known RBP	12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	FAM84B	Q96KN1	310 aa	Predicted RBP	12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	MEIS3	Q99687	375 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	SIL1	Q9H173	461 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	ECM29	Q5VYK3	1845 aa		12.89	□□□□□ -0.35
UBR1-207	ENST00000568782	SRGAP3	O43295	1099 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	CIAO1	O76071	339 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	IL15	P40933	162 aa	Predicted RBP	12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	FKBP1B	P68106	108 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	PTPN12	Q05209	780 aa	Known RBP	12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	LPIN2	Q92539	896 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	CCDC102A	Q96A19	550 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	CDCA5	Q96FF9	252 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	FAM205A	Q6ZU69	1335 aa		12.88	□□□□□ -0.35
UBR1-207	ENST00000568782	CTCF	P49711	727 aa	Predicted RBP	12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	CHAF1A	Q13111	956 aa	Predicted RBP	12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	NOG	Q13253	232 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	RGMB	Q6NW40	437 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	FBXO33	Q7Z6M2	555 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	TTF2	Q9UNY4	1162 aa	Known RBP	12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	JAG2	Q9Y219	1238 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	AKAP2	Q9Y2D5	859 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	IRS2	Q9Y4H2	1338 aa		12.87	□□□□□ -0.35
UBR1-207	ENST00000568782	ZNF646	O15015	1829 aa	Predicted RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	RFX5	P48382	616 aa	Predicted RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	ZNF157	P51786	506 aa	Predicted RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	TNFAIP1	Q13829	316 aa		12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	ATP2B3	Q16720	1220 aa		12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	CFAP100	Q494V2	611 aa		12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	DZIP1L	Q8IYY4	767 aa	Known RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	MAST3	O60307	1309 aa		12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	ASTN2	O75129	1339 aa	Predicted RBP	12.86	□□□□□ -0.35
UBR1-207	ENST00000568782	BCAM	P50895	628 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	ARMC9	Q7Z3E5	817 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	ITPRIP	Q8IWB1	547 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	CERS5	Q8N5B7	392 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	VGLL2	Q8N8G2	317 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	MTMR14	Q8NCE2	650 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	WDR66	Q8TBY9	1149 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	VEZT	Q9HBM0	779 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	COPRS	Q9NQ92	184 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	WBP1L	Q9NX94	342 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	SERPINA10	Q9UK55	444 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	PPP2R3B	Q9Y5P8	575 aa		12.85	□□□□□ -0.35
UBR1-207	ENST00000568782	AKAP11	Q9UKA4	1901 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	CA12	O43570	354 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	PPP1R12B	O60237	982 aa	Predicted RBP	12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	TNNI2	P48788	182 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	OS9	Q13438	667 aa	Predicted RBP	12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	SUPT20HL1	Q3ZLR7	823 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	GORAB	Q5T7V8	394 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	TMEM57	Q8N5G2	664 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	CHMP4B	Q9H444	224 aa	Known RBP	12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	TMOD2	Q9NZR1	351 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	SUGT1	Q9Y2Z0	365 aa		12.84	□□□□□ -0.35
UBR1-207	ENST00000568782	PCNT	O95613	3336 aa		12.83	□□□□□ -0.35
UBR1-207	ENST00000568782	ARAP2	Q8WZ64	1704 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	SPDYE2B	A6NHP3	402 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	AOC2	O75106	756 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	SPDYE6	P0CI01	402 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	FGFR2	P21802	821 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	HDLBP	Q00341	1268 aa	Known RBP	12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	MTX1	Q13505	466 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	DLK2	Q6UY11	383 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	ATG9A	Q7Z3C6	839 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	REM2	Q8IYK8	340 aa	Predicted RBP	12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	ZGPAT	Q8N5A5	531 aa	Known RBP	12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	TEKT1	Q969V4	418 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	DEFB129	Q9H1M3	183 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	DENND2A	Q9ULE3	1009 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	PA2G4	Q9UQ80	394 aa	Known RBP	12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	PAPPA2	Q9BXP8	1791 aa		12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	COL1A1	P02452	1464 aa	Predicted RBP	12.83	□□□□□ -0.36
UBR1-207	ENST00000568782	AK9	Q5TCS8	1911 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	CLRN2	A0PK11	232 aa		12.82	□□□□□ -0.36

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