RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SUPT20HL1Q3ZLR7 823 aa15.12■□□□□ 0.01
GTF3C1-209ENST00000568569 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
GTF3C1-209ENST00000568569 KIAA0100Q14667 2235 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-209ENST00000568569 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 IREB2P48200 963 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 CRHR2Q13324 411 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 CERS5Q8N5B7 392 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 EFCC1Q9HA90 598 aa15.11■□□□□ 0.01
GTF3C1-209ENST00000568569 CLRN2A0PK11 232 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 CSF1RP07333 972 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 GCKRQ14397 625 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 CFAP100Q494V2 611 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 C15orf52Q6ZUT6 534 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 CD99L2Q8TCZ2 262 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
GTF3C1-209ENST00000568569 F8W031 263 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 SP3Q02447 781 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 ZNF804AQ7Z570 1209 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 ANKRD13AQ8IZ07 590 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 PCDHAC2Q9Y5I4 1007 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 IRS2Q9Y4H2 1338 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 MYH3P11055 1940 aa15.09■□□□□ 0.01
GTF3C1-209ENST00000568569 SPEF2Q9C093 1822 aa15.08■□□□□ 0.01
GTF3C1-209ENST00000568569 ANKRD18BA2A2Z9 1011 aa15.08■□□□□ 0
GTF3C1-209ENST00000568569 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
GTF3C1-209ENST00000568569 GJA5P36382 358 aa15.08■□□□□ 0
GTF3C1-209ENST00000568569 CASP7P55210 303 aa15.08■□□□□ 0
GTF3C1-209ENST00000568569 NBPF12Q5TAG4 269 aaPredicted RBP15.08■□□□□ 0
GTF3C1-209ENST00000568569 PRMT6Q96LA8 375 aaPredicted RBP15.08■□□□□ 0
GTF3C1-209ENST00000568569 SNAP23O00161 211 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 TAF5LO75529 589 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 USP2O75604 605 aaPredicted RBP15.07■□□□□ 0
GTF3C1-209ENST00000568569 IL1R1P14778 569 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 EN2P19622 333 aaPredicted RBP15.07■□□□□ 0
GTF3C1-209ENST00000568569 TNFAIP1Q13829 316 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 RASA3Q14644 834 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 G2E3Q7L622 706 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
GTF3C1-209ENST00000568569 PTPN18Q99952 460 aa15.07■□□□□ 0
GTF3C1-209ENST00000568569 SLC4A2P04920 1241 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 RBM5P52756 815 aaKnown RBP eCLIP15.06■□□□□ 0
GTF3C1-209ENST00000568569 FLIIQ13045 1269 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 IFIT5Q13325 482 aaKnown RBP15.06■□□□□ 0
GTF3C1-209ENST00000568569 ARHGEF6Q15052 776 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
GTF3C1-209ENST00000568569 HELBQ8NG08 1087 aaPredicted RBP15.06■□□□□ 0
GTF3C1-209ENST00000568569 LINS1Q8NG48 757 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 OPTNQ96CV9 577 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 ZNF333Q96JL9 665 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 TMEM106CQ9BVX2 250 aa15.06■□□□□ 0
GTF3C1-209ENST00000568569 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
GTF3C1-209ENST00000568569 FXR1P51114 621 aaKnown RBP eCLIP15.05■□□□□ -0
GTF3C1-209ENST00000568569 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
GTF3C1-209ENST00000568569 DNAAF4Q8WXU2 420 aa15.05■□□□□ -0
GTF3C1-209ENST00000568569 ELP3Q9H9T3 547 aa15.05■□□□□ -0
GTF3C1-209ENST00000568569 JAG2Q9Y219 1238 aa15.05■□□□□ -0
GTF3C1-209ENST00000568569 AOX1Q06278 1338 aa15.05■□□□□ -0
GTF3C1-209ENST00000568569 CAP1Q01518 475 aa15.04■□□□□ -0
GTF3C1-209ENST00000568569 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
GTF3C1-209ENST00000568569 SLC9C1Q4G0N8 1177 aa15.04■□□□□ -0
GTF3C1-209ENST00000568569 NBPF11Q86T75 865 aa15.04■□□□□ -0
GTF3C1-209ENST00000568569 MS4A4AQ96JQ5 239 aa15.04■□□□□ -0
GTF3C1-209ENST00000568569 LAMB1P07942 1786 aa15.03■□□□□ -0
GTF3C1-209ENST00000568569 ZFYVE28Q9HCC9 887 aa15.03■□□□□ -0
GTF3C1-209ENST00000568569 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
GTF3C1-209ENST00000568569 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
GTF3C1-209ENST00000568569 GTF2A2P52657 109 aa15.02■□□□□ -0
GTF3C1-209ENST00000568569 TAF1CQ15572 869 aaPredicted RBP15.02■□□□□ -0
GTF3C1-209ENST00000568569 MFSD14BQ5SR56 506 aa15.02■□□□□ -0
GTF3C1-209ENST00000568569 BRI3BPQ8WY22 251 aa15.02■□□□□ -0
GTF3C1-209ENST00000568569 ZNF70Q9UC06 446 aaPredicted RBP15.02■□□□□ -0
GTF3C1-209ENST00000568569 SERPINA10Q9UK55 444 aa15.02■□□□□ -0
GTF3C1-209ENST00000568569 PTCH2Q9Y6C5 1203 aa15.02■□□□□ -0
GTF3C1-209ENST00000568569 FAM205AQ6ZU69 1335 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 CCL15-CCL14A0A0B4J2E2 113 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 FOXO4P98177 505 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 VGLL4Q14135 290 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 CCL15Q16663 113 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 TTF2Q9UNY4 1162 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-209ENST00000568569 RANBP2P49792 3224 aaKnown RBP15□□□□□ -0.01
GTF3C1-209ENST00000568569 SZT2Q5T011 3432 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
GTF3C1-209ENST00000568569 CCDC57Q2TAC2 916 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 LDHAL6AQ6ZMR3 332 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 WWC1Q8IX03 1113 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 TEPSINQ96N21 525 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 TDRD3Q9H7E2 651 aaKnown RBP15□□□□□ -0.01
GTF3C1-209ENST00000568569 CNNM1Q9NRU3 951 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
GTF3C1-209ENST00000568569 CSADQ9Y600 493 aa15□□□□□ -0.01
GTF3C1-209ENST00000568569 ECM29Q5VYK3 1845 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms