RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CYP21A2P08686 494 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 SCARF1Q14162 830 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 ZMYM1Q5SVZ6 1142 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
CMTM3-214ENST00000567572 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-214ENST00000567572 KIF3AQ9Y496 699 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 TAF6LQ9Y6J9 622 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 C4AP0C0L4 1744 aa20.91■□□□□ 0.94
CMTM3-214ENST00000567572 AKAP11Q9UKA4 1901 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 FGFR2P21802 821 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 PUM3Q15397 648 aaKnown RBP20.9■□□□□ 0.94
CMTM3-214ENST00000567572 TBC1D9BQ66K14 1250 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 ZSCAN16Q9H4T2 348 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-214ENST00000567572 PTMAP06454 111 aaKnown RBP20.9■□□□□ 0.94
CMTM3-214ENST00000567572 CCDC192P0DO97 292 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 CCDC129Q6ZRS4 1044 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 TTC6Q86TZ1 520 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
CMTM3-214ENST00000567572 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
CMTM3-214ENST00000567572 COL4A1P02462 1669 aa20.89■□□□□ 0.94
CMTM3-214ENST00000567572 RNF113AO15541 343 aaKnown RBP20.89■□□□□ 0.93
CMTM3-214ENST00000567572 FKBP4Q02790 459 aaKnown RBP eCLIP20.89■□□□□ 0.93
CMTM3-214ENST00000567572 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
CMTM3-214ENST00000567572 LPIN2Q92539 896 aa20.89■□□□□ 0.93
CMTM3-214ENST00000567572 DDX19AQ9NUU7 478 aaKnown RBP20.89■□□□□ 0.93
CMTM3-214ENST00000567572 SRP68Q9UHB9 627 aaKnown RBP20.89■□□□□ 0.93
CMTM3-214ENST00000567572 DHX32Q7L7V1 743 aaKnown RBP20.88■□□□□ 0.93
CMTM3-214ENST00000567572 SMARCC2Q8TAQ2 1214 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 MPHOSPH8Q99549 860 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 BRWD3Q6RI45 1802 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 PFKFB2O60825 505 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 ZAP70P43403 619 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 HMGN5P82970 282 aaKnown RBP20.88■□□□□ 0.93
CMTM3-214ENST00000567572 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
CMTM3-214ENST00000567572 Q6ZUG5 572 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 FBXL16Q8N461 479 aa20.88■□□□□ 0.93
CMTM3-214ENST00000567572 KDM4AO75164 1064 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 MCAMP43121 646 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 SLFNL1Q499Z3 407 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 TCEANC2Q96MN5 208 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 NUP62CLQ9H1M0 184 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 MAST3O60307 1309 aa20.87■□□□□ 0.93
CMTM3-214ENST00000567572 ZPR1O75312 459 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 TPM3P06753 285 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 ARID4AP29374 1257 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 IGHMBP2P38935 993 aaKnown RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 COL9A3Q14050 684 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 MAP3K11Q16584 847 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 NAA16Q6N069 864 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 C3orf67Q6ZVT6 689 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 HELBQ8NG08 1087 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 ARHGEF1Q92888 912 aaKnown RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 SPATA32Q96LK8 384 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 MYH7P12883 1935 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 ZFYP08048 801 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-214ENST00000567572 KIAA2012Q0VF49 1180 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 ATL3Q6DD88 541 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 PI16Q6UXB8 463 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
CMTM3-214ENST00000567572 A0A1B0GUL6 1792 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 GOLGA6L4A6NEF3 574 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 CCDC102BQ68D86 513 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 RBM43Q6ZSC3 357 aaKnown RBP20.85■□□□□ 0.93
CMTM3-214ENST00000567572 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
CMTM3-214ENST00000567572 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 USP25Q9UHP3 1055 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 CFAP45Q9UL16 551 aa20.85■□□□□ 0.93
CMTM3-214ENST00000567572 ADCY5O95622 1261 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 SLC5A1P13866 664 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 PHKA1P46020 1223 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 RESTQ13127 1097 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 GIMAP6Q6P9H5 292 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 LEO1Q8WVC0 666 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-214ENST00000567572 SETDB2Q96T68 719 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 EP400Q96L91 3159 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 UQCRFS1P1P0C7P4 283 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 EXOSC10Q01780 885 aaKnown RBP20.84■□□□□ 0.93
CMTM3-214ENST00000567572 FAM196AQ6ZSG2 479 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 FERMT3Q86UX7 667 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 FAM200AQ8TCP9 573 aa20.84■□□□□ 0.93
CMTM3-214ENST00000567572 CAVIN2O95810 425 aa20.83■□□□□ 0.93
CMTM3-214ENST00000567572 FGD1P98174 961 aa20.83■□□□□ 0.93
CMTM3-214ENST00000567572 STK3Q13188 491 aa20.83■□□□□ 0.93
CMTM3-214ENST00000567572 KRT27Q7Z3Y8 459 aa20.83■□□□□ 0.93
CMTM3-214ENST00000567572 BRF1Q92994 677 aa20.83■□□□□ 0.93
CMTM3-214ENST00000567572 H3BQV1 296 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 M0R2C6 588 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 IFFO2Q5TF58 517 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 STOX1Q6ZVD7 989 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 OSBP2Q969R2 916 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 ZNF274Q96GC6 653 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-214ENST00000567572 CTNNA3Q9UI47 895 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.82■□□□□ 0.92
CMTM3-214ENST00000567572 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
CMTM3-214ENST00000567572 RRP9O43818 475 aaKnown RBP20.82■□□□□ 0.92
CMTM3-214ENST00000567572 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms