RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TFCP2Q12800 502 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 SRRTQ9BXP5 876 aaKnown RBP18.21■□□□□ 0.51
COMMD4-215ENST00000566843 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-215ENST00000566843 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 ATP8B1O43520 1251 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 YEATS4O95619 227 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
COMMD4-215ENST00000566843 PTPN12Q05209 780 aaKnown RBP18.2■□□□□ 0.5
COMMD4-215ENST00000566843 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 HELLSQ9NRZ9 838 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 IKBKBO14920 756 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
COMMD4-215ENST00000566843 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 TRIM65Q6PJ69 517 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 KCNG4Q8TDN1 519 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 UBXN6Q9BZV1 441 aa18.2■□□□□ 0.5
COMMD4-215ENST00000566843 ERICH4A6NGS2 130 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 EVCP57679 992 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 SLC20A2Q08357 652 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 RIC3Q7Z5B4 369 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
COMMD4-215ENST00000566843 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 ARGLU1Q9NWB6 273 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-215ENST00000566843 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
COMMD4-215ENST00000566843 ZRSR1Q15695 479 aaKnown RBP18.19■□□□□ 0.5
COMMD4-215ENST00000566843 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
COMMD4-215ENST00000566843 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 NDUFB9Q9Y6M9 179 aa18.19■□□□□ 0.5
COMMD4-215ENST00000566843 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 TADA3O75528 432 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
COMMD4-215ENST00000566843 FANCCQ00597 558 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-215ENST00000566843 TMCO3Q6UWJ1 677 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 UBXN4Q92575 508 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-215ENST00000566843 E7EWF7 191 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 TPM1P09493 284 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 STK38Q15208 465 aa18.18■□□□□ 0.5
COMMD4-215ENST00000566843 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-215ENST00000566843 ZBTB22O15209 634 aa18.17■□□□□ 0.5
COMMD4-215ENST00000566843 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-215ENST00000566843 FCHSD1Q86WN1 690 aa18.17■□□□□ 0.5
COMMD4-215ENST00000566843 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
COMMD4-215ENST00000566843 HSD3B7Q9H2F3 369 aa18.17■□□□□ 0.5
COMMD4-215ENST00000566843 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
COMMD4-215ENST00000566843 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
COMMD4-215ENST00000566843 HOMER1Q86YM7 354 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 REXO1L1PQ8IX06 675 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 EFCAB8A8MWE9 144 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 SPTLC2O15270 562 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 ZNF202O95125 648 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 ZMYM1Q5SVZ6 1142 aa18.16■□□□□ 0.5
COMMD4-215ENST00000566843 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
COMMD4-215ENST00000566843 LRRFIP1Q32MZ4 808 aaKnown RBP18.15■□□□□ 0.5
COMMD4-215ENST00000566843 CCDC158Q5M9N0 1113 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 FANCGO15287 622 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 CMA1P23946 247 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 HNRNPH2P55795 449 aaKnown RBP18.15■□□□□ 0.5
COMMD4-215ENST00000566843 AXDND1Q5T1B0 1012 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-215ENST00000566843 KCNH5Q8NCM2 988 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 MYD88Q99836 296 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 TUBE1Q9UJT0 475 aa18.15■□□□□ 0.5
COMMD4-215ENST00000566843 C5P01031 1676 aa18.14■□□□□ 0.5
COMMD4-215ENST00000566843 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.5
COMMD4-215ENST00000566843 CBFA2T2O43439 604 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 TEX35Q5T0J7 233 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 RGS22Q8NE09 1264 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 MNS1Q8NEH6 495 aa18.14■□□□□ 0.49
COMMD4-215ENST00000566843 TRPM3Q9HCF6 1732 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-215ENST00000566843 BIN1O00499 593 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 MYO1BO43795 1136 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 HSPD1P10809 573 aaKnown RBP18.13■□□□□ 0.49
COMMD4-215ENST00000566843 CAPN2P17655 700 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
COMMD4-215ENST00000566843 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 LMOD1P29536 600 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-215ENST00000566843 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 PFKFB1P16118 471 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 CARD6Q9BX69 1037 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
COMMD4-215ENST00000566843 ZSCAN12O43309 604 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms