RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 KCNQ5Q9NR82 932 aa20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
SCAMP2-208ENST00000566557 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 SASH1O94885 1247 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 EPHX2P34913 555 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 ABT1Q9ULW3 272 aaKnown RBP20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 IQSEC3Q9UPP2 1182 aaPredicted RBP20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 PCDHB15Q9Y5E8 787 aa20.16■□□□□ 0.82
SCAMP2-208ENST00000566557 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
SCAMP2-208ENST00000566557 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
SCAMP2-208ENST00000566557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
SCAMP2-208ENST00000566557 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 USP17L3A6NCW0 530 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 USP17L4A6NCW7 530 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 ADORA1P30542 326 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 BCAMP50895 628 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 TIMM10P62072 90 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 GTF2IP78347 998 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 USP17L1Q7RTZ2 530 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 JAG2Q9Y219 1238 aa20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-208ENST00000566557 SCN4AP35499 1836 aa20.13■□□□□ 0.81
SCAMP2-208ENST00000566557 RGS19P49795 217 aa20.13■□□□□ 0.81
SCAMP2-208ENST00000566557 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
SCAMP2-208ENST00000566557 AAMPQ13685 434 aa20.13■□□□□ 0.81
SCAMP2-208ENST00000566557 BEGAINQ9BUH8 593 aa20.13■□□□□ 0.81
SCAMP2-208ENST00000566557 IL1R1P14778 569 aa20.12■□□□□ 0.81
SCAMP2-208ENST00000566557 TNNI3KQ59H18 835 aa20.12■□□□□ 0.81
SCAMP2-208ENST00000566557 TTLL5Q6EMB2 1281 aa20.12■□□□□ 0.81
SCAMP2-208ENST00000566557 IL1RAPL2Q9NP60 686 aa20.12■□□□□ 0.81
SCAMP2-208ENST00000566557 FPGT-TNNI3KV9GXZ4 949 aa20.12■□□□□ 0.81
SCAMP2-208ENST00000566557 RAB11FIP3O75154 756 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 RSBN1LQ6PCB5 846 aaPredicted RBP20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 PAXIP1Q6ZW49 1069 aaPredicted RBP20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 FBXO33Q7Z6M2 555 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 RHPN1Q8TCX5 695 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 KIF1BPQ96EK5 621 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 XAGE2Q96GT9 111 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 MXD3Q9BW11 206 aa20.11■□□□□ 0.81
SCAMP2-208ENST00000566557 VIL1P09327 827 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 PHKA1P46020 1223 aa20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 SCNN1DP51172 638 aa20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 GRM1Q13255 1194 aa20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 STRIP1Q5VSL9 837 aa20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 TDRD7Q8NHU6 1098 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 GPR108Q9NPR9 543 aa20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-208ENST00000566557 RPS12P25398 132 aaKnown RBP20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 DACT2Q5SW24 774 aa20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 CCDC102BQ68D86 513 aa20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 AACSQ86V21 672 aa20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 GPRC5DQ9NZD1 345 aa20.09■□□□□ 0.81
SCAMP2-208ENST00000566557 MYO3BQ8WXR4 1341 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 EPS15P42566 896 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 CAPNS2Q96L46 248 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 DBNDD2Q9BQY9 259 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
SCAMP2-208ENST00000566557 COL1A1P02452 1464 aaPredicted RBP20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 NEFLP07196 543 aa20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 ECE1P42892 770 aa20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 TTC39AQ5SRH9 613 aa20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 AGBL3Q8NEM8 1001 aa20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 EAF2Q96CJ1 260 aaPredicted RBP20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
SCAMP2-208ENST00000566557 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 F8W031 263 aaPredicted RBP20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 H7C1D1 291 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 MFSD14BQ5SR56 506 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 CYP4F22Q6NT55 531 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 DPF2Q92785 391 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 TSKSQ9UJT2 592 aa20.06■□□□□ 0.8
SCAMP2-208ENST00000566557 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 CCDC158Q5M9N0 1113 aa20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 RWDD1Q9H446 243 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 DBNLQ9UJU6 430 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-208ENST00000566557 USP17L8P0C7I0 530 aa20.04■□□□□ 0.8
SCAMP2-208ENST00000566557 HDAC1Q13547 482 aaPredicted RBP20.04■□□□□ 0.8
SCAMP2-208ENST00000566557 RBM26Q5T8P6 1007 aaKnown RBP20.04■□□□□ 0.8
SCAMP2-208ENST00000566557 CERS5Q8N5B7 392 aa20.04■□□□□ 0.8
SCAMP2-208ENST00000566557 DENND2AQ9ULE3 1009 aa20.04■□□□□ 0.8
SCAMP2-208ENST00000566557 SEMA3EO15041 775 aa20.03■□□□□ 0.8
SCAMP2-208ENST00000566557 UQCRFS1P1P0C7P4 283 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms