RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CNTN3Q9P232 1028 aa5.24□□□□□ -1.57
SMG1-212ENST00000566328 IKBKEQ14164 716 aa5.23□□□□□ -1.57
SMG1-212ENST00000566328 TMEM102Q8N9M5 508 aaPredicted RBP5.23□□□□□ -1.57
SMG1-212ENST00000566328 C12orf50Q8NA57 414 aaPredicted RBP5.23□□□□□ -1.57
SMG1-212ENST00000566328 BSNDQ8WZ55 320 aa5.23□□□□□ -1.57
SMG1-212ENST00000566328 METTL22Q9BUU2 404 aaPredicted RBP5.23□□□□□ -1.57
SMG1-212ENST00000566328 OSBPL1AQ9BXW6 950 aa5.23□□□□□ -1.57
SMG1-212ENST00000566328 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
SMG1-212ENST00000566328 ADGRE2Q9UHX3 823 aa5.23□□□□□ -1.57
SMG1-212ENST00000566328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.22□□□□□ -1.57
SMG1-212ENST00000566328 NFKBIEO00221 500 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 FOSL1P15407 271 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 USP11P51784 963 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 SRPK2P78362 688 aaKnown RBP5.22□□□□□ -1.57
SMG1-212ENST00000566328 DNM1Q05193 864 aaKnown RBP5.22□□□□□ -1.57
SMG1-212ENST00000566328 C8orf34Q49A92 452 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 PAOXQ6QHF9 649 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 C1orf127Q8N9H9 656 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 SMG8Q8ND04 991 aaKnown RBP5.22□□□□□ -1.57
SMG1-212ENST00000566328 EDEM1Q92611 657 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 FBXL18Q96ME1 805 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 YIPF2Q9BWQ6 316 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 SUGCTQ9HAC7 445 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 SOX13Q9UN79 622 aa5.22□□□□□ -1.57
SMG1-212ENST00000566328 FAM95CA0A1B0GW59 222 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 EDN3P14138 238 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 ATP2B4P23634 1241 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 MZF1P28698 734 aaPredicted RBP5.21□□□□□ -1.58
SMG1-212ENST00000566328 SGO2Q562F6 1265 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 NOM1Q5C9Z4 860 aaKnown RBP5.21□□□□□ -1.58
SMG1-212ENST00000566328 ATCAYQ86WG3 371 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 FBXL6Q8N531 539 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 HELQQ8TDG4 1101 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 OSMRQ99650 979 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 TMPRSS13Q9BYE2 586 aa5.21□□□□□ -1.58
SMG1-212ENST00000566328 SOX17Q9H6I2 414 aaPredicted RBP5.21□□□□□ -1.58
SMG1-212ENST00000566328 SOX1O00570 391 aaPredicted RBP5.2□□□□□ -1.58
SMG1-212ENST00000566328 TIAF1O95411 115 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 HOXA10P31260 410 aaPredicted RBP5.2□□□□□ -1.58
SMG1-212ENST00000566328 NFKBIBQ15653 356 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 EXOSC6Q5RKV6 272 aaKnown RBP5.2□□□□□ -1.58
SMG1-212ENST00000566328 ALKBH2Q6NS38 261 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 ABI1Q8IZP0 508 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 NXPE3Q969Y0 559 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 ASIC4Q96FT7 647 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 USP26Q9BXU7 913 aa5.2□□□□□ -1.58
SMG1-212ENST00000566328 PDGFAP04085 211 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 PRNPP04156 253 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 F13BP05160 661 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 ACPPP15309 386 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 MSMPQ1L6U9 139 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 VSIG10LQ86VR7 867 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 TP53INP2Q8IXH6 220 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 PBXIP1Q96AQ6 731 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 GGNBP2Q9H3C7 697 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 CCDC39Q9UFE4 941 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 SEPT3Q9UH03 358 aa5.19□□□□□ -1.58
SMG1-212ENST00000566328 ARID1BQ8NFD5 2236 aaPredicted RBP5.19□□□□□ -1.58
SMG1-212ENST00000566328 LOC100289279A0A1B0GTE1 492 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 CYP26A1O43174 497 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 PHACTR2O75167 634 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 TRPA1O75762 1119 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 USP5P45974 858 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 EHHADHQ08426 723 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 HP1BP3Q5SSJ5 553 aaPredicted RBP5.18□□□□□ -1.58
SMG1-212ENST00000566328 VN1R5Q7Z5H4 357 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 ASAP3Q8TDY4 903 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 HHIPQ96QV1 700 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 ZKSCAN3Q9BRR0 538 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 CHRDQ9H2X0 955 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
SMG1-212ENST00000566328 BSDC1Q9NW68 430 aaPredicted RBP5.18□□□□□ -1.58
SMG1-212ENST00000566328 JUNBP17275 347 aaPredicted RBP5.17□□□□□ -1.58
SMG1-212ENST00000566328 EIF1AXP47813 144 aaKnown RBP5.17□□□□□ -1.58
SMG1-212ENST00000566328 CYP27A1Q02318 531 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 AAMPQ13685 434 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 DUSP27Q5VZP5 1158 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 AGBL5Q8NDL9 886 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 SNX29Q8TEQ0 813 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 FBLIM1Q8WUP2 373 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 TBC1D32Q96NH3 1257 aa5.17□□□□□ -1.58
SMG1-212ENST00000566328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.17□□□□□ -1.58
SMG1-212ENST00000566328 EREGO14944 169 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 DRD2P14416 443 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 SOX4Q06945 474 aaPredicted RBP5.16□□□□□ -1.58
SMG1-212ENST00000566328 HGSNATQ68CP4 663 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 CBLL1Q75N03 491 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 ZAR1Q86SH2 424 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 EZH1Q92800 747 aaPredicted RBP5.16□□□□□ -1.58
SMG1-212ENST00000566328 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
SMG1-212ENST00000566328 BHLHE41Q9C0J9 482 aaPredicted RBP5.16□□□□□ -1.58
SMG1-212ENST00000566328 A6NHS1 94 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 TNFRSF21O75509 655 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 CYP11A1P05108 521 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 ESRRAP11474 423 aaPredicted RBP5.15□□□□□ -1.59
SMG1-212ENST00000566328 MPSTP25325 297 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 GSTM4Q03013 218 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 MAP7Q14244 749 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 CDPF1Q6NVV7 123 aa5.15□□□□□ -1.59
SMG1-212ENST00000566328 C2CD4AQ8NCU7 369 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms