RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
USB1-213ENST00000566292 ANKRD44Q8N8A2 993 aa23.11■■□□□ 1.29
USB1-213ENST00000566292 RASAL3Q86YV0 1011 aa23.1■■□□□ 1.29
USB1-213ENST00000566292 RIPOR2Q9Y4F9 1068 aa23.1■■□□□ 1.29
USB1-213ENST00000566292 ARAP2Q8WZ64 1704 aa23.09■■□□□ 1.29
USB1-213ENST00000566292 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
USB1-213ENST00000566292 JAG2Q9Y219 1238 aa23.09■■□□□ 1.29
USB1-213ENST00000566292 UBE4AQ14139 1066 aa23.08■■□□□ 1.29
USB1-213ENST00000566292 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
USB1-213ENST00000566292 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
USB1-213ENST00000566292 UBE2Q2LH0YL09 131 aa23.07■■□□□ 1.28
USB1-213ENST00000566292 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
USB1-213ENST00000566292 FKBP1AP62942 108 aaKnown RBP23.07■■□□□ 1.28
USB1-213ENST00000566292 MTMR14Q8NCE2 650 aa23.07■■□□□ 1.28
USB1-213ENST00000566292 F8W031 263 aaPredicted RBP23.06■■□□□ 1.28
USB1-213ENST00000566292 GYG1P46976 350 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 DLGAP5Q15398 846 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 LRRC24Q50LG9 513 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 APOBEC3FQ8IUX4 373 aaKnown RBP23.06■■□□□ 1.28
USB1-213ENST00000566292 ABHD8Q96I13 439 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 FAM84BQ96KN1 310 aaPredicted RBP23.06■■□□□ 1.28
USB1-213ENST00000566292 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 FAM205AQ6ZU69 1335 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 MROH5Q6ZUA9 1318 aa23.06■■□□□ 1.28
USB1-213ENST00000566292 TDRD7Q8NHU6 1098 aaKnown RBP23.05■■□□□ 1.28
USB1-213ENST00000566292 CSRNP1Q96S65 589 aa23.05■■□□□ 1.28
USB1-213ENST00000566292 HIBADHP31937 336 aaKnown RBP23.04■■□□□ 1.28
USB1-213ENST00000566292 CFAP100Q494V2 611 aa23.04■■□□□ 1.28
USB1-213ENST00000566292 KLHDC4Q8TBB5 520 aa23.04■■□□□ 1.28
USB1-213ENST00000566292 COL1A1P02452 1464 aaPredicted RBP23.04■■□□□ 1.28
USB1-213ENST00000566292 NF2P35240 595 aa23.03■■□□□ 1.28
USB1-213ENST00000566292 TTLL12Q14166 644 aaPredicted RBP23.03■■□□□ 1.28
USB1-213ENST00000566292 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
USB1-213ENST00000566292 RNF186Q9NXI6 227 aa23.03■■□□□ 1.28
USB1-213ENST00000566292 SAGE1Q9NXZ1 904 aa23.03■■□□□ 1.28
USB1-213ENST00000566292 AOX1Q06278 1338 aa23.03■■□□□ 1.28
USB1-213ENST00000566292 SPDYE2BA6NHP3 402 aa23.02■■□□□ 1.28
USB1-213ENST00000566292 SPDYE6P0CI01 402 aa23.02■■□□□ 1.28
USB1-213ENST00000566292 PRMT6Q96LA8 375 aaPredicted RBP23.02■■□□□ 1.28
USB1-213ENST00000566292 TRPA1O75762 1119 aa23.01■■□□□ 1.27
USB1-213ENST00000566292 PRKG1Q13976 671 aa23.01■■□□□ 1.27
USB1-213ENST00000566292 METTL24Q5JXM2 366 aa23.01■■□□□ 1.27
USB1-213ENST00000566292 MFSD14BQ5SR56 506 aa23.01■■□□□ 1.27
USB1-213ENST00000566292 DEFB129Q9H1M3 183 aa23.01■■□□□ 1.27
USB1-213ENST00000566292 CLRN2A0PK11 232 aa23■■□□□ 1.27
USB1-213ENST00000566292 CT47B1P0C2W7 299 aaPredicted RBP23■■□□□ 1.27
USB1-213ENST00000566292 FBXO33Q7Z6M2 555 aa23■■□□□ 1.27
USB1-213ENST00000566292 SSC5DA1L4H1 1573 aa23■■□□□ 1.27
USB1-213ENST00000566292 PDE8BO95263 885 aa22.99■■□□□ 1.27
USB1-213ENST00000566292 RFX5P48382 616 aaPredicted RBP22.99■■□□□ 1.27
USB1-213ENST00000566292 PTPN12Q05209 780 aaKnown RBP22.99■■□□□ 1.27
USB1-213ENST00000566292 REM2Q8IYK8 340 aaPredicted RBP22.99■■□□□ 1.27
USB1-213ENST00000566292 NOB1Q9ULX3 412 aaKnown RBP22.99■■□□□ 1.27
USB1-213ENST00000566292 FZD1Q9UP38 647 aa22.99■■□□□ 1.27
USB1-213ENST00000566292 MYH13Q9UKX3 1938 aa22.98■■□□□ 1.27
USB1-213ENST00000566292 ARMC9Q7Z3E5 817 aa22.98■■□□□ 1.27
USB1-213ENST00000566292 MCOLN1Q9GZU1 580 aa22.98■■□□□ 1.27
USB1-213ENST00000566292 IQSEC3Q9UPP2 1182 aaPredicted RBP22.98■■□□□ 1.27
USB1-213ENST00000566292 MYO1BO43795 1136 aa22.97■■□□□ 1.27
USB1-213ENST00000566292 RBM5P52756 815 aaKnown RBP eCLIP22.97■■□□□ 1.27
USB1-213ENST00000566292 LDLRAD1Q5T700 205 aa22.97■■□□□ 1.27
USB1-213ENST00000566292 VEZTQ9HBM0 779 aa22.97■■□□□ 1.27
USB1-213ENST00000566292 ANGEL1Q9UNK9 670 aaKnown RBP22.97■■□□□ 1.27
USB1-213ENST00000566292 TTF2Q9UNY4 1162 aaKnown RBP22.97■■□□□ 1.27
USB1-213ENST00000566292 PPP2R3BQ9Y5P8 575 aa22.97■■□□□ 1.27
USB1-213ENST00000566292 GRIK5Q16478 980 aa22.96■■□□□ 1.27
USB1-213ENST00000566292 VPS37DQ86XT2 251 aa22.96■■□□□ 1.27
USB1-213ENST00000566292 LAMB1P07942 1786 aa22.95■■□□□ 1.26
USB1-213ENST00000566292 FGFR2P21802 821 aa22.95■■□□□ 1.26
USB1-213ENST00000566292 MKRN3Q13064 507 aaKnown RBP22.95■■□□□ 1.26
USB1-213ENST00000566292 DGKZQ13574 1117 aa22.95■■□□□ 1.26
USB1-213ENST00000566292 SERPINA10Q9UK55 444 aa22.95■■□□□ 1.26
USB1-213ENST00000566292 EYA2O00167 538 aa22.94■■□□□ 1.26
USB1-213ENST00000566292 BCAMP50895 628 aa22.94■■□□□ 1.26
USB1-213ENST00000566292 RARSP54136 660 aaKnown RBP22.94■■□□□ 1.26
USB1-213ENST00000566292 CHAF1AQ13111 956 aaPredicted RBP22.94■■□□□ 1.26
USB1-213ENST00000566292 MAP3K11Q16584 847 aa22.94■■□□□ 1.26
USB1-213ENST00000566292 CAVIN4Q5BKX8 364 aa22.94■■□□□ 1.26
USB1-213ENST00000566292 OTOFQ9HC10 1997 aa22.94■■□□□ 1.26
USB1-213ENST00000566292 UBTFL1P0CB47 393 aaPredicted RBP22.93■■□□□ 1.26
USB1-213ENST00000566292 PUM3Q15397 648 aaKnown RBP22.93■■□□□ 1.26
USB1-213ENST00000566292 SPDYE2Q495Y8 402 aa22.93■■□□□ 1.26
USB1-213ENST00000566292 NBPF12Q5TAG4 269 aaPredicted RBP22.93■■□□□ 1.26
USB1-213ENST00000566292 ATG9AQ7Z3C6 839 aa22.93■■□□□ 1.26
USB1-213ENST00000566292 API5Q9BZZ5 524 aaKnown RBP22.93■■□□□ 1.26
USB1-213ENST00000566292 ZNF70Q9UC06 446 aaPredicted RBP22.93■■□□□ 1.26
USB1-213ENST00000566292 KIF16BQ96L93 1317 aa22.92■■□□□ 1.26
USB1-213ENST00000566292 CCDC85CA6NKD9 419 aa22.92■■□□□ 1.26
USB1-213ENST00000566292 CRKP46108 304 aa22.92■■□□□ 1.26
USB1-213ENST00000566292 TM4SF4P48230 202 aa22.92■■□□□ 1.26
USB1-213ENST00000566292 RASA3Q14644 834 aa22.92■■□□□ 1.26
USB1-213ENST00000566292 DZIP1LQ8IYY4 767 aaKnown RBP22.92■■□□□ 1.26
USB1-213ENST00000566292 TDRD3Q9H7E2 651 aaKnown RBP22.92■■□□□ 1.26
USB1-213ENST00000566292 FRAT2O75474 233 aaPredicted RBP22.91■■□□□ 1.26
USB1-213ENST00000566292 IFIT1P09914 478 aaKnown RBP22.91■■□□□ 1.26
USB1-213ENST00000566292 SPRYD7Q5W111 196 aa22.91■■□□□ 1.26
USB1-213ENST00000566292 TBC1D22AQ8WUA7 517 aa22.91■■□□□ 1.26
USB1-213ENST00000566292 PPP1R12BO60237 982 aaPredicted RBP22.9■■□□□ 1.26
USB1-213ENST00000566292 SUPT20HL1Q3ZLR7 823 aa22.9■■□□□ 1.26
USB1-213ENST00000566292 CLMNQ96JQ2 1002 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms