RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 SLAIN2Q9P270 581 aa7.09□□□□□ -1.27
PALB2-204ENST00000566069 CCDC39Q9UFE4 941 aa7.09□□□□□ -1.27
PALB2-204ENST00000566069 DLGAP3O95886 979 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 FOSL1P15407 271 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 CABP4P57796 275 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 JAG1P78504 1218 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 OGFOD2Q6N063 350 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 FDX2Q6P4F2 183 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 FBXL6Q8N531 539 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
PALB2-204ENST00000566069 PDE2AO00408 941 aaPredicted RBP7.07□□□□□ -1.28
PALB2-204ENST00000566069 TIAF1O95411 115 aa7.07□□□□□ -1.28
PALB2-204ENST00000566069 PRNPP04156 253 aa7.07□□□□□ -1.28
PALB2-204ENST00000566069 XKR5Q6UX68 686 aa7.07□□□□□ -1.28
PALB2-204ENST00000566069 GGNBP2Q9H3C7 697 aa7.07□□□□□ -1.28
PALB2-204ENST00000566069 ADMP35318 185 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
PALB2-204ENST00000566069 SMG8Q8ND04 991 aaKnown RBP7.06□□□□□ -1.28
PALB2-204ENST00000566069 CHRDQ9H2X0 955 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 ATG3Q9NT62 314 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 SEPT3Q9UH03 358 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
PALB2-204ENST00000566069 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
PALB2-204ENST00000566069 C19orf57Q0VDD7 668 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 CDPF1Q6NVV7 123 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 ABTB2Q8N961 1025 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 NXPE3Q969Y0 559 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 SUGCTQ9HAC7 445 aa7.05□□□□□ -1.28
PALB2-204ENST00000566069 A6NHS1 94 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 DRD2P14416 443 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 CES1P23141 567 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 TMEM102Q8N9M5 508 aaPredicted RBP7.04□□□□□ -1.28
PALB2-204ENST00000566069 OSBPL1AQ9BXW6 950 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
PALB2-204ENST00000566069 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
PALB2-204ENST00000566069 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
PALB2-204ENST00000566069 RXRBP28702 533 aa7.03□□□□□ -1.28
PALB2-204ENST00000566069 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
PALB2-204ENST00000566069 GATA6Q92908 595 aa7.03□□□□□ -1.28
PALB2-204ENST00000566069 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
PALB2-204ENST00000566069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.02□□□□□ -1.29
PALB2-204ENST00000566069 ATG7O95352 703 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 C8AP07357 584 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 ITGB5P18084 799 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 ARL4DP49703 201 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 NFKBIBQ15653 356 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 CPSF6Q16630 551 aaKnown RBP eCLIP7.02□□□□□ -1.29
PALB2-204ENST00000566069 POU5F2Q8N7G0 328 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
PALB2-204ENST00000566069 GIMAP7Q8NHV1 300 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 BSNDQ8WZ55 320 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 EDEM1Q92611 657 aa7.02□□□□□ -1.29
PALB2-204ENST00000566069 ANGEL1Q9UNK9 670 aaKnown RBP7.02□□□□□ -1.29
PALB2-204ENST00000566069 IKBKEQ14164 716 aa7.01□□□□□ -1.29
PALB2-204ENST00000566069 EXOSC6Q5RKV6 272 aaKnown RBP7.01□□□□□ -1.29
PALB2-204ENST00000566069 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
PALB2-204ENST00000566069 FBXL18Q96ME1 805 aa7.01□□□□□ -1.29
PALB2-204ENST00000566069 OSMRQ99650 979 aa7.01□□□□□ -1.29
PALB2-204ENST00000566069 ZKSCAN3Q9BRR0 538 aa7.01□□□□□ -1.29
PALB2-204ENST00000566069 CYP4F12Q9HCS2 524 aa7.01□□□□□ -1.29
PALB2-204ENST00000566069 FAM170BA6NMN3 283 aa7□□□□□ -1.29
PALB2-204ENST00000566069 ZAR1Q86SH2 424 aa7□□□□□ -1.29
PALB2-204ENST00000566069 USP26Q9BXU7 913 aa7□□□□□ -1.29
PALB2-204ENST00000566069 PRKAG2Q9UGJ0 569 aa7□□□□□ -1.29
PALB2-204ENST00000566069 EREGO14944 169 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 CYP26A1O43174 497 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 PDGFAP04085 211 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 ESRRAP11474 423 aaPredicted RBP6.99□□□□□ -1.29
PALB2-204ENST00000566069 DNM1Q05193 864 aaKnown RBP6.99□□□□□ -1.29
PALB2-204ENST00000566069 PAOXQ6QHF9 649 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 TP53INP2Q8IXH6 220 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
PALB2-204ENST00000566069 PAK6Q9NQU5 681 aaPredicted RBP6.99□□□□□ -1.29
PALB2-204ENST00000566069 RPLP1P05386 114 aaKnown RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 USP11P51784 963 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 SOX4Q06945 474 aaPredicted RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 C8orf34Q49A92 452 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 TBC1D32Q96NH3 1257 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 METTL22Q9BUU2 404 aaPredicted RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
PALB2-204ENST00000566069 SOX17Q9H6I2 414 aaPredicted RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 ZC3H7BQ9UGR2 993 aaKnown RBP6.98□□□□□ -1.29
PALB2-204ENST00000566069 CTSBP07858 339 aa6.96□□□□□ -1.3
PALB2-204ENST00000566069 JUNBP17275 347 aaPredicted RBP6.96□□□□□ -1.3
PALB2-204ENST00000566069 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.3
PALB2-204ENST00000566069 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.3
PALB2-204ENST00000566069 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
PALB2-204ENST00000566069 BHLHE41Q9C0J9 482 aaPredicted RBP6.96□□□□□ -1.3
PALB2-204ENST00000566069 ATP2B4P23634 1241 aa6.95□□□□□ -1.3
PALB2-204ENST00000566069 NOM1Q5C9Z4 860 aaKnown RBP6.95□□□□□ -1.3
PALB2-204ENST00000566069 HELQQ8TDG4 1101 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms