RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 FSTL1Q12841 308 aa25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 TNNI3KQ59H18 835 aa25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 SMC1BQ8NDV3 1235 aa25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 XAGE2Q96GT9 111 aa25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 GNL3LQ9NVN8 582 aaKnown RBP25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 FPGT-TNNI3KV9GXZ4 949 aa25.97■■□□□ 1.75
SHCBP1-205ENST00000566016 ADORA1P30542 326 aa25.96■■□□□ 1.75
SHCBP1-205ENST00000566016 CCDC102BQ68D86 513 aa25.96■■□□□ 1.75
SHCBP1-205ENST00000566016 TBC1D22AQ8WUA7 517 aa25.96■■□□□ 1.75
SHCBP1-205ENST00000566016 COL1A1P02452 1464 aaPredicted RBP25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 SHTN1A0MZ66 631 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 RAB11FIP3O75154 756 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 FRAT2O75474 233 aaPredicted RBP25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 PHKA1P46020 1223 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 EAPPQ56P03 285 aaPredicted RBP25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 OGFOD1Q8N543 542 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 CERS5Q8N5B7 392 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 MXD3Q9BW11 206 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 PCDHB15Q9Y5E8 787 aa25.95■■□□□ 1.74
SHCBP1-205ENST00000566016 PDS5AQ29RF7 1337 aaKnown RBP25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 POTEIP0CG38 1075 aa25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 POTEJP0CG39 1038 aa25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 C1QTNF8P60827 252 aa25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 MFSD14BQ5SR56 506 aa25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 KIF1BPQ96EK5 621 aa25.94■■□□□ 1.74
SHCBP1-205ENST00000566016 CHADLQ6NUI6 762 aa25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 RHPN1Q8TCX5 695 aa25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 ZC3H15Q8WU90 426 aaKnown RBP25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 NEUROD6Q96NK8 337 aa25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 IQSEC3Q9UPP2 1182 aaPredicted RBP25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 ECM29Q5VYK3 1845 aa25.93■■□□□ 1.74
SHCBP1-205ENST00000566016 TRPM4Q8TD43 1214 aa25.92■■□□□ 1.74
SHCBP1-205ENST00000566016 AKAP11Q9UKA4 1901 aa25.92■■□□□ 1.74
SHCBP1-205ENST00000566016 HDAC9Q9UKV0 1011 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 DENND2AQ9ULE3 1009 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 SUGT1Q9Y2Z0 365 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 HIRAP54198 1017 aaPredicted RBP25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 KIF4BQ2VIQ3 1234 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 SAMD7Q7Z3H4 446 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 KIAA0825Q8IV33 1275 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 WDR66Q8TBY9 1149 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 DCTPP1Q9H773 170 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 MYOZ2Q9NPC6 264 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 PGAP2Q9UHJ9 254 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 JAG2Q9Y219 1238 aa25.91■■□□□ 1.74
SHCBP1-205ENST00000566016 POLR2AP24928 1970 aaKnown RBP25.9■■□□□ 1.74
SHCBP1-205ENST00000566016 EGFRP00533 1210 aa25.9■■□□□ 1.74
SHCBP1-205ENST00000566016 ARID4AP29374 1257 aaPredicted RBP25.9■■□□□ 1.74
SHCBP1-205ENST00000566016 GORABQ5T7V8 394 aa25.9■■□□□ 1.74
SHCBP1-205ENST00000566016 EAF2Q96CJ1 260 aaPredicted RBP25.9■■□□□ 1.74
SHCBP1-205ENST00000566016 SALL1Q9NSC2 1324 aa25.89■■□□□ 1.74
SHCBP1-205ENST00000566016 CHAF1AQ13111 956 aaPredicted RBP25.89■■□□□ 1.73
SHCBP1-205ENST00000566016 RASGRF1Q13972 1273 aa25.89■■□□□ 1.73
SHCBP1-205ENST00000566016 TBC1D10BQ4KMP7 808 aaPredicted RBP25.89■■□□□ 1.73
SHCBP1-205ENST00000566016 DBNLQ9UJU6 430 aaKnown RBP25.89■■□□□ 1.73
SHCBP1-205ENST00000566016 CLASRPQ8N2M8 674 aaKnown RBP25.88■■□□□ 1.73
SHCBP1-205ENST00000566016 ZNF512BQ96KM6 892 aaPredicted RBP25.88■■□□□ 1.73
SHCBP1-205ENST00000566016 DBNDD2Q9BQY9 259 aa25.88■■□□□ 1.73
SHCBP1-205ENST00000566016 CLEC11AQ9Y240 323 aa25.88■■□□□ 1.73
SHCBP1-205ENST00000566016 UQCRFS1P1P0C7P4 283 aa25.87■■□□□ 1.73
SHCBP1-205ENST00000566016 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
SHCBP1-205ENST00000566016 EXOC6Q8TAG9 804 aa25.87■■□□□ 1.73
SHCBP1-205ENST00000566016 CCDC158Q5M9N0 1113 aa25.86■■□□□ 1.73
SHCBP1-205ENST00000566016 AACSQ86V21 672 aa25.86■■□□□ 1.73
SHCBP1-205ENST00000566016 MTMR14Q8NCE2 650 aa25.86■■□□□ 1.73
SHCBP1-205ENST00000566016 LRRCC1Q9C099 1032 aa25.86■■□□□ 1.73
SHCBP1-205ENST00000566016 IL1RAPL2Q9NP60 686 aa25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 MAST3O60307 1309 aa25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 ZGPATQ8N5A5 531 aaKnown RBP25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 ZBED3Q96IU2 234 aaPredicted RBP25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 TLR7Q9NYK1 1049 aaKnown RBP25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 SERPINA10Q9UK55 444 aa25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 TTF2Q9UNY4 1162 aaKnown RBP25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 TRPM7Q96QT4 1865 aa25.85■■□□□ 1.73
SHCBP1-205ENST00000566016 APBB1O00213 710 aa25.84■■□□□ 1.73
SHCBP1-205ENST00000566016 HDLBPQ00341 1268 aaKnown RBP25.84■■□□□ 1.73
SHCBP1-205ENST00000566016 RBM26Q5T8P6 1007 aaKnown RBP25.84■■□□□ 1.73
SHCBP1-205ENST00000566016 MAP1SQ66K74 1059 aaPredicted RBP25.84■■□□□ 1.73
SHCBP1-205ENST00000566016 WNT10BO00744 389 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 ITGBL1O95965 494 aaPredicted RBP25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 CNTROBQ8N137 903 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 SPATA5Q8NB90 893 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 MRIQ9BWK5 157 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 CCDC8Q9H0W5 538 aaPredicted RBP25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 HMG20BQ9P0W2 317 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 PITPNM2Q9BZ72 1349 aa25.83■■□□□ 1.73
SHCBP1-205ENST00000566016 F8W031 263 aaPredicted RBP25.82■■□□□ 1.72
SHCBP1-205ENST00000566016 MCAMP43121 646 aa25.82■■□□□ 1.72
SHCBP1-205ENST00000566016 TTC39AQ5SRH9 613 aa25.82■■□□□ 1.72
SHCBP1-205ENST00000566016 PASKQ96RG2 1323 aa25.82■■□□□ 1.72
SHCBP1-205ENST00000566016 SCARF1Q14162 830 aa25.81■■□□□ 1.72
SHCBP1-205ENST00000566016 GRIK5Q16478 980 aa25.81■■□□□ 1.72
SHCBP1-205ENST00000566016 GGA3Q9NZ52 723 aa25.81■■□□□ 1.72
SHCBP1-205ENST00000566016 MYH2Q9UKX2 1941 aa25.81■■□□□ 1.72
SHCBP1-205ENST00000566016 MAST2Q6P0Q8 1798 aa25.81■■□□□ 1.72
SHCBP1-205ENST00000566016 SPDYE2BA6NHP3 402 aa25.8■■□□□ 1.72
SHCBP1-205ENST00000566016 IFIT2P09913 472 aaKnown RBP25.8■■□□□ 1.72
SHCBP1-205ENST00000566016 SPDYE6P0CI01 402 aa25.8■■□□□ 1.72
SHCBP1-205ENST00000566016 DLGAP5Q15398 846 aa25.8■■□□□ 1.72
SHCBP1-205ENST00000566016 NBPF9Q3BBW0 867 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms