RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 OSBPL3Q9H4L5 887 aa15.44■□□□□ 0.06
SF3B3-206ENST00000565990 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
SF3B3-206ENST00000565990 STRIP1Q5VSL9 837 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 DENND2AQ9ULE3 1009 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 TTC41PQ6P2S7 1318 aa15.43■□□□□ 0.06
SF3B3-206ENST00000565990 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 TNIP1Q15025 636 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 DACT2Q5SW24 774 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 OTUD7AQ8TE49 926 aaPredicted RBP15.42■□□□□ 0.06
SF3B3-206ENST00000565990 HMG20BQ9P0W2 317 aa15.42■□□□□ 0.06
SF3B3-206ENST00000565990 MX1P20591 662 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 PDE4AP27815 886 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 MCAMP43121 646 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 PDE1AP54750 535 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 EIF6P56537 245 aaKnown RBP15.41■□□□□ 0.06
SF3B3-206ENST00000565990 GTF2IP78347 998 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 RASGRF1Q13972 1273 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 SCARF1Q14162 830 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 TTC39AQ5SRH9 613 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 CIAPIN1Q6FI81 312 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 GPC2Q8N158 579 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 SPATA5Q8NB90 893 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 GMLQ99445 158 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 SALL1Q9NSC2 1324 aa15.41■□□□□ 0.06
SF3B3-206ENST00000565990 GLTPD2A6NH11 291 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 PSMD14O00487 310 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 IGSF3O75054 1194 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 RAD17O75943 681 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 WDR66Q8TBY9 1149 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 PI4K2BQ8TCG2 481 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
SF3B3-206ENST00000565990 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
SF3B3-206ENST00000565990 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
SF3B3-206ENST00000565990 DPY19L2Q6NUT2 758 aa15.39■□□□□ 0.05
SF3B3-206ENST00000565990 AGBL3Q8NEM8 1001 aa15.39■□□□□ 0.05
SF3B3-206ENST00000565990 TBC1D22AQ8WUA7 517 aa15.39■□□□□ 0.05
SF3B3-206ENST00000565990 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
SF3B3-206ENST00000565990 HAUS7Q99871 368 aa15.39■□□□□ 0.05
SF3B3-206ENST00000565990 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
SF3B3-206ENST00000565990 AOX1Q06278 1338 aa15.39■□□□□ 0.05
SF3B3-206ENST00000565990 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
SF3B3-206ENST00000565990 CYP2E1P05181 493 aaPredicted RBP15.38■□□□□ 0.05
SF3B3-206ENST00000565990 MMP14P50281 582 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
SF3B3-206ENST00000565990 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 DPF2Q92785 391 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 MRIQ9BWK5 157 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 SUGT1Q9Y2Z0 365 aa15.38■□□□□ 0.05
SF3B3-206ENST00000565990 ERC2O15083 957 aa15.37■□□□□ 0.05
SF3B3-206ENST00000565990 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
SF3B3-206ENST00000565990 DDNO94850 711 aaPredicted RBP15.37■□□□□ 0.05
SF3B3-206ENST00000565990 RPS12P25398 132 aaKnown RBP15.37■□□□□ 0.05
SF3B3-206ENST00000565990 PI16Q6UXB8 463 aa15.37■□□□□ 0.05
SF3B3-206ENST00000565990 L3MBTL3Q96JM7 780 aaPredicted RBP15.37■□□□□ 0.05
SF3B3-206ENST00000565990 BOLA2Q9H3K6 86 aa15.37■□□□□ 0.05
SF3B3-206ENST00000565990 MYO3BQ8WXR4 1341 aa15.37■□□□□ 0.05
SF3B3-206ENST00000565990 ZAP70P43403 619 aa15.36■□□□□ 0.05
SF3B3-206ENST00000565990 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
SF3B3-206ENST00000565990 MFSD14BQ5SR56 506 aa15.36■□□□□ 0.05
SF3B3-206ENST00000565990 ZGPATQ8N5A5 531 aaKnown RBP15.36■□□□□ 0.05
SF3B3-206ENST00000565990 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
SF3B3-206ENST00000565990 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
SF3B3-206ENST00000565990 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
SF3B3-206ENST00000565990 WDR90Q96KV7 1748 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 POTECB2RU33 542 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 GRIK5Q16478 980 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 TSHZ3Q63HK5 1081 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 ANTXR1Q9H6X2 564 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 JAG2Q9Y219 1238 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 SCN4AP35499 1836 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
SF3B3-206ENST00000565990 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 SCNN1DP51172 638 aa15.34■□□□□ 0.05
SF3B3-206ENST00000565990 ZNF280AP59817 542 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 HDLBPQ00341 1268 aaKnown RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 TTF1Q15361 905 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 SPTY2D1Q68D10 685 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-206ENST00000565990 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
SF3B3-206ENST00000565990 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
SF3B3-206ENST00000565990 NDUFB9Q9Y6M9 179 aa15.34■□□□□ 0.05
SF3B3-206ENST00000565990 USP17L8P0C7I0 530 aa15.33■□□□□ 0.04
SF3B3-206ENST00000565990 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
SF3B3-206ENST00000565990 PIH1D3Q9NQM4 214 aaKnown RBP15.33■□□□□ 0.04
SF3B3-206ENST00000565990 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
SF3B3-206ENST00000565990 GPRC5DQ9NZD1 345 aa15.33■□□□□ 0.04
SF3B3-206ENST00000565990 CNOT7Q9UIV1 285 aaKnown RBP15.33■□□□□ 0.04
SF3B3-206ENST00000565990 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
SF3B3-206ENST00000565990 ZNF384Q8TF68 577 aa15.32■□□□□ 0.04
SF3B3-206ENST00000565990 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
SF3B3-206ENST00000565990 BACH2Q9BYV9 841 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms