RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ARAP2Q8WZ64 1704 aa30■■■□□ 2.39
RAB40C-209ENST00000565511 UBE2Q2LH0YL09 131 aa30■■■□□ 2.39
RAB40C-209ENST00000565511 ZNF804AQ7Z570 1209 aa30■■■□□ 2.39
RAB40C-209ENST00000565511 RABL6Q3YEC7 729 aaPredicted RBP29.99■■■□□ 2.39
RAB40C-209ENST00000565511 PTPRCP08575 1304 aa29.98■■■□□ 2.39
RAB40C-209ENST00000565511 F8W031 263 aaPredicted RBP29.98■■■□□ 2.39
RAB40C-209ENST00000565511 FKBP1BP68106 108 aa29.98■■■□□ 2.39
RAB40C-209ENST00000565511 HDAC9Q9UKV0 1011 aa29.98■■■□□ 2.39
RAB40C-209ENST00000565511 CSRNP1Q96S65 589 aa29.97■■■□□ 2.39
RAB40C-209ENST00000565511 RIPOR2Q9Y4F9 1068 aa29.97■■■□□ 2.39
RAB40C-209ENST00000565511 SSC5DA1L4H1 1573 aa29.96■■■□□ 2.39
RAB40C-209ENST00000565511 GYG1P46976 350 aa29.96■■■□□ 2.39
RAB40C-209ENST00000565511 LRRC24Q50LG9 513 aa29.96■■■□□ 2.39
RAB40C-209ENST00000565511 TRMT2AQ8IZ69 625 aaKnown RBP29.96■■■□□ 2.39
RAB40C-209ENST00000565511 KLHDC4Q8TBB5 520 aa29.95■■■□□ 2.39
RAB40C-209ENST00000565511 USP44Q9H0E7 712 aa29.95■■■□□ 2.39
RAB40C-209ENST00000565511 RNF186Q9NXI6 227 aa29.95■■■□□ 2.39
RAB40C-209ENST00000565511 FZD1Q9UP38 647 aa29.95■■■□□ 2.39
RAB40C-209ENST00000565511 MMP14P50281 582 aa29.94■■■□□ 2.38
RAB40C-209ENST00000565511 FAM84BQ96KN1 310 aaPredicted RBP29.94■■■□□ 2.38
RAB40C-209ENST00000565511 UBE4AQ14139 1066 aa29.93■■■□□ 2.38
RAB40C-209ENST00000565511 DLGAP5Q15398 846 aa29.93■■■□□ 2.38
RAB40C-209ENST00000565511 APOBEC3FQ8IUX4 373 aaKnown RBP29.93■■■□□ 2.38
RAB40C-209ENST00000565511 MTMR14Q8NCE2 650 aa29.93■■■□□ 2.38
RAB40C-209ENST00000565511 TDRD7Q8NHU6 1098 aaKnown RBP29.93■■■□□ 2.38
RAB40C-209ENST00000565511 FAM205AQ6ZU69 1335 aa29.93■■■□□ 2.38
RAB40C-209ENST00000565511 TRPA1O75762 1119 aa29.92■■■□□ 2.38
RAB40C-209ENST00000565511 FKBP1AP62942 108 aaKnown RBP29.92■■■□□ 2.38
RAB40C-209ENST00000565511 PRKG1Q13976 671 aa29.92■■■□□ 2.38
RAB40C-209ENST00000565511 CFAP100Q494V2 611 aa29.92■■■□□ 2.38
RAB40C-209ENST00000565511 CLRN2A0PK11 232 aa29.91■■■□□ 2.38
RAB40C-209ENST00000565511 TTLL12Q14166 644 aaPredicted RBP29.91■■■□□ 2.38
RAB40C-209ENST00000565511 VGLL2Q8N8G2 317 aa29.91■■■□□ 2.38
RAB40C-209ENST00000565511 PRMT6Q96LA8 375 aaPredicted RBP29.91■■■□□ 2.38
RAB40C-209ENST00000565511 MCOLN1Q9GZU1 580 aa29.91■■■□□ 2.38
RAB40C-209ENST00000565511 SAGE1Q9NXZ1 904 aa29.91■■■□□ 2.38
RAB40C-209ENST00000565511 SPDYE2BA6NHP3 402 aa29.9■■■□□ 2.38
RAB40C-209ENST00000565511 SPDYE6P0CI01 402 aa29.9■■■□□ 2.38
RAB40C-209ENST00000565511 ALDH1L2Q3SY69 923 aa29.9■■■□□ 2.38
RAB40C-209ENST00000565511 SMC4Q9NTJ3 1288 aa29.9■■■□□ 2.38
RAB40C-209ENST00000565511 COL1A1P02452 1464 aaPredicted RBP29.9■■■□□ 2.38
RAB40C-209ENST00000565511 PTPN12Q05209 780 aaKnown RBP29.89■■■□□ 2.38
RAB40C-209ENST00000565511 GRIK5Q16478 980 aa29.89■■■□□ 2.38
RAB40C-209ENST00000565511 DEFB129Q9H1M3 183 aa29.89■■■□□ 2.38
RAB40C-209ENST00000565511 MROH5Q6ZUA9 1318 aa29.89■■■□□ 2.38
RAB40C-209ENST00000565511 HIBADHP31937 336 aaKnown RBP29.88■■■□□ 2.37
RAB40C-209ENST00000565511 IQSEC3Q9UPP2 1182 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-209ENST00000565511 RFX5P48382 616 aaPredicted RBP29.87■■■□□ 2.37
RAB40C-209ENST00000565511 MKRN3Q13064 507 aaKnown RBP29.87■■■□□ 2.37
RAB40C-209ENST00000565511 NF2P35240 595 aa29.86■■■□□ 2.37
RAB40C-209ENST00000565511 METTL24Q5JXM2 366 aa29.86■■■□□ 2.37
RAB40C-209ENST00000565511 MFSD14BQ5SR56 506 aa29.86■■■□□ 2.37
RAB40C-209ENST00000565511 FBXO33Q7Z6M2 555 aa29.86■■■□□ 2.37
RAB40C-209ENST00000565511 DGKZQ13574 1117 aa29.85■■■□□ 2.37
RAB40C-209ENST00000565511 OTOFQ9HC10 1997 aa29.84■■■□□ 2.37
RAB40C-209ENST00000565511 CCER2I3L3R5 266 aa29.84■■■□□ 2.37
RAB40C-209ENST00000565511 LDLRAD1Q5T700 205 aa29.84■■■□□ 2.37
RAB40C-209ENST00000565511 VEZTQ9HBM0 779 aa29.84■■■□□ 2.37
RAB40C-209ENST00000565511 ANGEL1Q9UNK9 670 aaKnown RBP29.84■■■□□ 2.37
RAB40C-209ENST00000565511 TTF2Q9UNY4 1162 aaKnown RBP29.83■■■□□ 2.37
RAB40C-209ENST00000565511 CCDC85CA6NKD9 419 aa29.82■■■□□ 2.36
RAB40C-209ENST00000565511 PDE8BO95263 885 aa29.82■■■□□ 2.36
RAB40C-209ENST00000565511 ARMC9Q7Z3E5 817 aa29.82■■■□□ 2.36
RAB40C-209ENST00000565511 NOB1Q9ULX3 412 aaKnown RBP29.82■■■□□ 2.36
RAB40C-209ENST00000565511 RBM5P52756 815 aaKnown RBP eCLIP29.81■■■□□ 2.36
RAB40C-209ENST00000565511 NBPF12Q5TAG4 269 aaPredicted RBP29.81■■■□□ 2.36
RAB40C-209ENST00000565511 CDAN1Q8IWY9 1227 aa29.81■■■□□ 2.36
RAB40C-209ENST00000565511 CLMNQ96JQ2 1002 aa29.81■■■□□ 2.36
RAB40C-209ENST00000565511 LAMB1P07942 1786 aa29.81■■■□□ 2.36
RAB40C-209ENST00000565511 MYH13Q9UKX3 1938 aa29.81■■■□□ 2.36
RAB40C-209ENST00000565511 FGFR2P21802 821 aa29.8■■■□□ 2.36
RAB40C-209ENST00000565511 BCAMP50895 628 aa29.8■■■□□ 2.36
RAB40C-209ENST00000565511 CHAF1AQ13111 956 aaPredicted RBP29.8■■■□□ 2.36
RAB40C-209ENST00000565511 SPDYE2Q495Y8 402 aa29.79■■■□□ 2.36
RAB40C-209ENST00000565511 ZNF70Q9UC06 446 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-209ENST00000565511 PPP2R3BQ9Y5P8 575 aa29.79■■■□□ 2.36
RAB40C-209ENST00000565511 MAP3K11Q16584 847 aa29.78■■■□□ 2.36
RAB40C-209ENST00000565511 REM2Q8IYK8 340 aaPredicted RBP29.78■■■□□ 2.36
RAB40C-209ENST00000565511 TDRD3Q9H7E2 651 aaKnown RBP29.78■■■□□ 2.36
RAB40C-209ENST00000565511 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.78■■■□□ 2.36
RAB40C-209ENST00000565511 EYA2O00167 538 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 MYO1BO43795 1136 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 TBC1D8O95759 1140 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 RASA3Q14644 834 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 SPRYD7Q5W111 196 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 ATG9AQ7Z3C6 839 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 SERPINA10Q9UK55 444 aa29.77■■■□□ 2.36
RAB40C-209ENST00000565511 CRKP46108 304 aa29.76■■■□□ 2.35
RAB40C-209ENST00000565511 TM4SF4P48230 202 aa29.76■■■□□ 2.35
RAB40C-209ENST00000565511 DZIP1LQ8IYY4 767 aaKnown RBP29.76■■■□□ 2.35
RAB40C-209ENST00000565511 CT47B1P0C2W7 299 aaPredicted RBP29.75■■■□□ 2.35
RAB40C-209ENST00000565511 RARSP54136 660 aaKnown RBP29.75■■■□□ 2.35
RAB40C-209ENST00000565511 VPS37DQ86XT2 251 aa29.75■■■□□ 2.35
RAB40C-209ENST00000565511 R3HDMLQ9H3Y0 253 aa29.75■■■□□ 2.35
RAB40C-209ENST00000565511 UBTFL1P0CB47 393 aaPredicted RBP29.74■■■□□ 2.35
RAB40C-209ENST00000565511 PUM3Q15397 648 aaKnown RBP29.74■■■□□ 2.35
RAB40C-209ENST00000565511 CAVIN4Q5BKX8 364 aa29.73■■■□□ 2.35
RAB40C-209ENST00000565511 TEPSINQ96N21 525 aa29.73■■■□□ 2.35
RAB40C-209ENST00000565511 MEIS3Q99687 375 aa29.73■■■□□ 2.35
RAB40C-209ENST00000565511 SIL1Q9H173 461 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 352.4 ms