RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
CDH1-206ENST00000564676 HTRA3P83110 453 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
CDH1-206ENST00000564676 GMLQ99445 158 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 PSME4Q14997 1843 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 SASH1O94885 1247 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 EGFRP00533 1210 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 FGFR2P21802 821 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
CDH1-206ENST00000564676 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDH1-206ENST00000564676 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
CDH1-206ENST00000564676 FBXO33Q7Z6M2 555 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 KIAA0825Q8IV33 1275 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 TDRD7Q8NHU6 1098 aaKnown RBP12.33□□□□□ -0.44
CDH1-206ENST00000564676 LPIN2Q92539 896 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
CDH1-206ENST00000564676 ZNF609O15014 1411 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 BCAMP50895 628 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 CHAF1AQ13111 956 aaPredicted RBP12.32□□□□□ -0.44
CDH1-206ENST00000564676 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
CDH1-206ENST00000564676 CHMP4BQ9H444 224 aaKnown RBP12.32□□□□□ -0.44
CDH1-206ENST00000564676 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 PGAP2Q9UHJ9 254 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
CDH1-206ENST00000564676 PASKQ96RG2 1323 aa12.32□□□□□ -0.44
CDH1-206ENST00000564676 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
CDH1-206ENST00000564676 MMP14P50281 582 aa12.31□□□□□ -0.44
CDH1-206ENST00000564676 FKBP1AP62942 108 aaKnown RBP12.31□□□□□ -0.44
CDH1-206ENST00000564676 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
CDH1-206ENST00000564676 SCARF1Q14162 830 aa12.31□□□□□ -0.44
CDH1-206ENST00000564676 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
CDH1-206ENST00000564676 GLIS2Q9BZE0 524 aaPredicted RBP12.31□□□□□ -0.44
CDH1-206ENST00000564676 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
CDH1-206ENST00000564676 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
CDH1-206ENST00000564676 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
CDH1-206ENST00000564676 TMEM88BA6NKF7 163 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 TRAF5O00463 557 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 SURF6O75683 361 aaKnown RBP12.3□□□□□ -0.44
CDH1-206ENST00000564676 TFCP2Q12800 502 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 MFSD14BQ5SR56 506 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 KRT26Q7Z3Y9 468 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 SSH3Q8TE77 659 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
CDH1-206ENST00000564676 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
CDH1-206ENST00000564676 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH1-206ENST00000564676 TIMM10P62072 90 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH1-206ENST00000564676 C20orf194Q5TEA3 1177 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
CDH1-206ENST00000564676 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 GGA3Q9NZ52 723 aa12.29□□□□□ -0.44
CDH1-206ENST00000564676 ASTN2O75129 1339 aaPredicted RBP12.29□□□□□ -0.44
CDH1-206ENST00000564676 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 ADORA1P30542 326 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 RBM5P52756 815 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDH1-206ENST00000564676 DLGAP5Q15398 846 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
CDH1-206ENST00000564676 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 ZNF408Q9H9D4 720 aa12.28□□□□□ -0.44
CDH1-206ENST00000564676 ABT1Q9ULW3 272 aaKnown RBP12.28□□□□□ -0.44
CDH1-206ENST00000564676 TTF2Q9UNY4 1162 aaKnown RBP12.28□□□□□ -0.44
CDH1-206ENST00000564676 ADM5C9JUS6 153 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 WNT10BO00744 389 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
CDH1-206ENST00000564676 PHKA1P46020 1223 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 CFAP100Q494V2 611 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 GORABQ5T7V8 394 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 DNAJC5GQ8N7S2 189 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.45
CDH1-206ENST00000564676 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
CDH1-206ENST00000564676 TRPM7Q96QT4 1865 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 HMMRO75330 724 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 CST9Q5W186 159 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
CDH1-206ENST00000564676 WDR66Q8TBY9 1149 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
CDH1-206ENST00000564676 DENND2AQ9ULE3 1009 aa12.26□□□□□ -0.45
CDH1-206ENST00000564676 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
CDH1-206ENST00000564676 MYO1BO43795 1136 aa12.25□□□□□ -0.45
CDH1-206ENST00000564676 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
CDH1-206ENST00000564676 SCAF8Q9UPN6 1271 aaKnown RBP12.25□□□□□ -0.45
CDH1-206ENST00000564676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms