RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CEP120Q8N960 986 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 ABTB2Q8N961 1025 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 KLHL23Q8NBE8 558 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 RUSC1Q9BVN2 902 aa6.11□□□□□ -1.43
CHD9-211ENST00000564600 ABI2Q9NYB9 513 aaPredicted RBP6.11□□□□□ -1.43
CHD9-211ENST00000564600 KIF4AO95239 1232 aa6.1□□□□□ -1.43
CHD9-211ENST00000564600 MAP4P27816 1152 aaKnown RBP6.1□□□□□ -1.43
CHD9-211ENST00000564600 DNM1Q05193 864 aaKnown RBP6.1□□□□□ -1.43
CHD9-211ENST00000564600 ECM1Q16610 540 aa6.1□□□□□ -1.43
CHD9-211ENST00000564600 FDX2Q6P4F2 183 aa6.1□□□□□ -1.43
CHD9-211ENST00000564600 DCAF11Q8TEB1 546 aa6.1□□□□□ -1.43
CHD9-211ENST00000564600 H3BRJ5 948 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 GAS2O43903 313 aaKnown RBP6.09□□□□□ -1.43
CHD9-211ENST00000564600 ABL1P00519 1130 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 PDGFAP04085 211 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 NPR3P17342 541 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 PTPRAP18433 802 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 SERPINB4P48594 390 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 JAG1P78504 1218 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 NOM1Q5C9Z4 860 aaKnown RBP6.09□□□□□ -1.43
CHD9-211ENST00000564600 PIM2Q9P1W9 311 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 USTQ9Y2C2 406 aa6.09□□□□□ -1.43
CHD9-211ENST00000564600 FZD6O60353 706 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 DLGAP3O95886 979 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 DRD2P14416 443 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 CACTIN-AS1Q8N1I8 211 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 C1orf127Q8N9H9 656 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 RNF208Q9H0X6 261 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 ELP3Q9H9T3 547 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 CCDC87Q9NVE4 849 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 FAM13BQ9NYF5 915 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 POLIQ9UNA4 740 aa6.08□□□□□ -1.44
CHD9-211ENST00000564600 NFKBIEO00221 500 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 ADMP35318 185 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 NFKBIBQ15653 356 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 C12orf50Q8NA57 414 aaPredicted RBP6.07□□□□□ -1.44
CHD9-211ENST00000564600 USP26Q9BXU7 913 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 CHRDQ9H2X0 955 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
CHD9-211ENST00000564600 ANGEL1Q9UNK9 670 aaKnown RBP6.07□□□□□ -1.44
CHD9-211ENST00000564600 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
CHD9-211ENST00000564600 FKBP4Q02790 459 aaKnown RBP eCLIP6.06□□□□□ -1.44
CHD9-211ENST00000564600 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 CDPF1Q6NVV7 123 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 ZNF438Q7Z4V0 828 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 TP53INP2Q8IXH6 220 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 FBLIM1Q8WUP2 373 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 OSBPL1AQ9BXW6 950 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 ATG3Q9NT62 314 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 FNDC3AQ9Y2H6 1198 aaKnown RBP6.06□□□□□ -1.44
CHD9-211ENST00000564600 LEMD3Q9Y2U8 911 aa6.06□□□□□ -1.44
CHD9-211ENST00000564600 FAM170BA6NMN3 283 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 FAM177BA6PVY3 158 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 C8AP07357 584 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 CABP4P57796 275 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 PIP4K2BP78356 416 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 PDE12Q6L8Q7 609 aaKnown RBP6.05□□□□□ -1.44
CHD9-211ENST00000564600 DZANK1Q9NVP4 752 aa6.05□□□□□ -1.44
CHD9-211ENST00000564600 PDE2AO00408 941 aaPredicted RBP6.04□□□□□ -1.44
CHD9-211ENST00000564600 SOX1O00570 391 aaPredicted RBP6.04□□□□□ -1.44
CHD9-211ENST00000564600 ICMTO60725 284 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 FAM13AO94988 1023 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 XKR5Q6UX68 686 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 TXNDC2Q86VQ3 553 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 SALL4Q9UJQ4 1053 aa6.04□□□□□ -1.44
CHD9-211ENST00000564600 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
CHD9-211ENST00000564600 H3BRB1 525 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 FOSL1P15407 271 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 CES1P23141 567 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 ARHGAP4P98171 946 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
CHD9-211ENST00000564600 AAMPQ13685 434 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 NUTM2GQ5VZR2 741 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 TUT1Q9H6E5 874 aaKnown RBP6.03□□□□□ -1.44
CHD9-211ENST00000564600 LRRC4CQ9HCJ2 640 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 SOX13Q9UN79 622 aa6.03□□□□□ -1.44
CHD9-211ENST00000564600 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 FAM95CA0A1B0GW59 222 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 EREGO14944 169 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 TNFRSF21O75509 655 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 C19orf57Q0VDD7 668 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 ZNF124Q15973 351 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
CHD9-211ENST00000564600 CBLL1Q75N03 491 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 VN1R5Q7Z5H4 357 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 TBC1D32Q96NH3 1257 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 TMPRSS13Q9BYE2 586 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 OSGEPQ9NPF4 335 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 HIF3AQ9Y2N7 669 aa6.02□□□□□ -1.45
CHD9-211ENST00000564600 ARID1BQ8NFD5 2236 aaPredicted RBP6.01□□□□□ -1.45
CHD9-211ENST00000564600 METTL12A8MUP2 240 aa6.01□□□□□ -1.45
CHD9-211ENST00000564600 CYP26A1O43174 497 aa6.01□□□□□ -1.45
CHD9-211ENST00000564600 ALKBH2Q6NS38 261 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms