RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 TOMM70O94826 608 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 EPHX2P34913 555 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 BCAMP50895 628 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 ZNF280AP59817 542 aaPredicted RBP20.52■□□□□ 0.88
RNF40-206ENST00000564260 TIMM10P62072 90 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 CCDC102BQ68D86 513 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 OGFOD1Q8N543 542 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 KCNQ5Q9NR82 932 aa20.52■□□□□ 0.88
RNF40-206ENST00000564260 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 UQCRFS1P1P0C7P4 283 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 GORABQ5T7V8 394 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 ZGPATQ8N5A5 531 aaKnown RBP20.51■□□□□ 0.87
RNF40-206ENST00000564260 RBM46Q8TBY0 533 aaKnown RBP20.51■□□□□ 0.87
RNF40-206ENST00000564260 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
RNF40-206ENST00000564260 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 NEUROD6Q96NK8 337 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
RNF40-206ENST00000564260 HDAC9Q9UKV0 1011 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 SCN9AQ15858 1988 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 SALL1Q9NSC2 1324 aa20.51■□□□□ 0.87
RNF40-206ENST00000564260 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
RNF40-206ENST00000564260 RWDD1Q9H446 243 aaPredicted RBP20.5■□□□□ 0.87
RNF40-206ENST00000564260 ARID4AP29374 1257 aaPredicted RBP20.49■□□□□ 0.87
RNF40-206ENST00000564260 LDHDQ86WU2 507 aa20.49■□□□□ 0.87
RNF40-206ENST00000564260 MICALL2Q8IY33 904 aa20.49■□□□□ 0.87
RNF40-206ENST00000564260 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
RNF40-206ENST00000564260 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
RNF40-206ENST00000564260 MAST3O60307 1309 aa20.49■□□□□ 0.87
RNF40-206ENST00000564260 FSTL1Q12841 308 aa20.48■□□□□ 0.87
RNF40-206ENST00000564260 MFSD14BQ5SR56 506 aa20.48■□□□□ 0.87
RNF40-206ENST00000564260 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
RNF40-206ENST00000564260 MRIQ9BWK5 157 aa20.48■□□□□ 0.87
RNF40-206ENST00000564260 ADORA1P30542 326 aa20.47■□□□□ 0.87
RNF40-206ENST00000564260 EPS15P42566 896 aa20.47■□□□□ 0.87
RNF40-206ENST00000564260 PHKA1P46020 1223 aa20.47■□□□□ 0.87
RNF40-206ENST00000564260 HDLBPQ00341 1268 aaKnown RBP20.47■□□□□ 0.87
RNF40-206ENST00000564260 MTMR14Q8NCE2 650 aa20.47■□□□□ 0.87
RNF40-206ENST00000564260 FBXW7Q969H0 707 aa20.47■□□□□ 0.87
RNF40-206ENST00000564260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.47■□□□□ 0.87
RNF40-206ENST00000564260 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
RNF40-206ENST00000564260 TMED8Q6PL24 325 aaPredicted RBP20.46■□□□□ 0.87
RNF40-206ENST00000564260 AACSQ86V21 672 aa20.46■□□□□ 0.87
RNF40-206ENST00000564260 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
RNF40-206ENST00000564260 PGAP2Q9UHJ9 254 aa20.46■□□□□ 0.87
RNF40-206ENST00000564260 DBNLQ9UJU6 430 aaKnown RBP20.46■□□□□ 0.87
RNF40-206ENST00000564260 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
RNF40-206ENST00000564260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
RNF40-206ENST00000564260 MYOZ2Q9NPC6 264 aa20.45■□□□□ 0.86
RNF40-206ENST00000564260 SERPINA10Q9UK55 444 aa20.45■□□□□ 0.86
RNF40-206ENST00000564260 RASGRF1Q13972 1273 aa20.44■□□□□ 0.86
RNF40-206ENST00000564260 TTC39AQ5SRH9 613 aa20.44■□□□□ 0.86
RNF40-206ENST00000564260 SPTY2D1Q68D10 685 aaPredicted RBP20.44■□□□□ 0.86
RNF40-206ENST00000564260 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
RNF40-206ENST00000564260 DBNDD2Q9BQY9 259 aa20.44■□□□□ 0.86
RNF40-206ENST00000564260 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
RNF40-206ENST00000564260 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
RNF40-206ENST00000564260 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
RNF40-206ENST00000564260 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
RNF40-206ENST00000564260 CHADLQ6NUI6 762 aa20.43■□□□□ 0.86
RNF40-206ENST00000564260 SPATA5Q8NB90 893 aa20.43■□□□□ 0.86
RNF40-206ENST00000564260 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
RNF40-206ENST00000564260 KIAA0825Q8IV33 1275 aa20.42■□□□□ 0.86
RNF40-206ENST00000564260 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
RNF40-206ENST00000564260 GPATCH3Q96I76 525 aa20.42■□□□□ 0.86
RNF40-206ENST00000564260 IQSEC3Q9UPP2 1182 aaPredicted RBP20.42■□□□□ 0.86
RNF40-206ENST00000564260 PITPNM2Q9BZ72 1349 aa20.42■□□□□ 0.86
RNF40-206ENST00000564260 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
RNF40-206ENST00000564260 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
RNF40-206ENST00000564260 SLF2Q8IX21 1173 aa20.41■□□□□ 0.86
RNF40-206ENST00000564260 CCDC8Q9H0W5 538 aaPredicted RBP20.41■□□□□ 0.86
RNF40-206ENST00000564260 HMG20BQ9P0W2 317 aa20.41■□□□□ 0.86
RNF40-206ENST00000564260 LDHBP07195 334 aaKnown RBP20.4■□□□□ 0.86
RNF40-206ENST00000564260 ZBED3Q96IU2 234 aaPredicted RBP20.4■□□□□ 0.86
RNF40-206ENST00000564260 MXD3Q9BW11 206 aa20.4■□□□□ 0.86
RNF40-206ENST00000564260 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
RNF40-206ENST00000564260 APBB1O00213 710 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 MYO1BO43795 1136 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 NEFLP07196 543 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 MCAMP43121 646 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 DLGAP5Q15398 846 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 HHIPL2Q6UWX4 724 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 SAMD7Q7Z3H4 446 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 TRPM4Q8TD43 1214 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 TEKT1Q969V4 418 aa20.39■□□□□ 0.85
RNF40-206ENST00000564260 ATP5JP18859 108 aa20.38■□□□□ 0.85
RNF40-206ENST00000564260 HIRAP54198 1017 aaPredicted RBP20.38■□□□□ 0.85
RNF40-206ENST00000564260 TTF1Q15361 905 aaPredicted RBP20.38■□□□□ 0.85
RNF40-206ENST00000564260 TBC1D10BQ4KMP7 808 aaPredicted RBP20.38■□□□□ 0.85
RNF40-206ENST00000564260 ERICH6BQ5W0A0 696 aa20.38■□□□□ 0.85
RNF40-206ENST00000564260 TLR7Q9NYK1 1049 aaKnown RBP20.38■□□□□ 0.85
RNF40-206ENST00000564260 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
RNF40-206ENST00000564260 MYH13Q9UKX3 1938 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 WNT10BO00744 389 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 FAM163AQ96GL9 167 aaPredicted RBP20.37■□□□□ 0.85
RNF40-206ENST00000564260 ZDHHC15Q96MV8 337 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms