RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 EYA3Q99504 573 aa11.95□□□□□ -0.5
UBFD1-203ENST00000564106 PLA2G12BQ9BX93 195 aa11.95□□□□□ -0.5
UBFD1-203ENST00000564106 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
UBFD1-203ENST00000564106 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
UBFD1-203ENST00000564106 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
UBFD1-203ENST00000564106 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
UBFD1-203ENST00000564106 MED23Q9ULK4 1368 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 AOX1Q06278 1338 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 ZC3H12CQ9C0D7 883 aaKnown RBP11.94□□□□□ -0.5
UBFD1-203ENST00000564106 GGA3Q9NZ52 723 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
UBFD1-203ENST00000564106 H7C1D1 291 aa11.93□□□□□ -0.5
UBFD1-203ENST00000564106 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
UBFD1-203ENST00000564106 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
UBFD1-203ENST00000564106 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
UBFD1-203ENST00000564106 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
UBFD1-203ENST00000564106 PCDHAC2Q9Y5I4 1007 aa11.93□□□□□ -0.5
UBFD1-203ENST00000564106 TAF5LO75529 589 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
UBFD1-203ENST00000564106 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 MOB2Q70IA6 237 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 KRT26Q7Z3Y9 468 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
UBFD1-203ENST00000564106 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
UBFD1-203ENST00000564106 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
UBFD1-203ENST00000564106 APBB1O00213 710 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 CHRNDQ07001 517 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 G3BP1Q13283 466 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBFD1-203ENST00000564106 SCARF1Q14162 830 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 NBPF9Q3BBW0 867 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
UBFD1-203ENST00000564106 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
UBFD1-203ENST00000564106 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
UBFD1-203ENST00000564106 SASH1O94885 1247 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 MX1P20591 662 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
UBFD1-203ENST00000564106 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 CDCA5Q96FF9 252 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
UBFD1-203ENST00000564106 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
UBFD1-203ENST00000564106 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-203ENST00000564106 CDC45O75419 566 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 PDE1AP54750 535 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 HUNKP57058 714 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 MYOZ2Q9NPC6 264 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
UBFD1-203ENST00000564106 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 ERC2O15083 957 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
UBFD1-203ENST00000564106 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 GBA2Q9HCG7 927 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-203ENST00000564106 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
UBFD1-203ENST00000564106 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 G3V3G9 751 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 GTF2IP78347 998 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
UBFD1-203ENST00000564106 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
UBFD1-203ENST00000564106 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 WNT10BO00744 389 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 IFIT2P09913 472 aaKnown RBP11.86□□□□□ -0.51
UBFD1-203ENST00000564106 ECE1P42892 770 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 GRIK5Q16478 980 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms