RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 F8W031 263 aaPredicted RBP38.3■■■■□ 3.72
CMTM4-204ENST00000563952 CIAO1O76071 339 aa38.3■■■■□ 3.72
CMTM4-204ENST00000563952 GNAI2P04899 355 aa38.3■■■■□ 3.72
CMTM4-204ENST00000563952 IFFO2Q5TF58 517 aa38.3■■■■□ 3.72
CMTM4-204ENST00000563952 DZIP1LQ8IYY4 767 aaKnown RBP38.3■■■■□ 3.72
CMTM4-204ENST00000563952 FBXO3Q9UK99 471 aa38.3■■■■□ 3.72
CMTM4-204ENST00000563952 SRGAP3O43295 1099 aa38.29■■■■□ 3.72
CMTM4-204ENST00000563952 MMP14P50281 582 aa38.29■■■■□ 3.72
CMTM4-204ENST00000563952 PAXIP1Q6ZW49 1069 aaPredicted RBP38.29■■■■□ 3.72
CMTM4-204ENST00000563952 FBXO33Q7Z6M2 555 aa38.29■■■■□ 3.72
CMTM4-204ENST00000563952 IQSEC3Q9UPP2 1182 aaPredicted RBP38.29■■■■□ 3.72
CMTM4-204ENST00000563952 TLL2Q9Y6L7 1015 aa38.29■■■■□ 3.72
CMTM4-204ENST00000563952 IFIT1P09914 478 aaKnown RBP38.28■■■■□ 3.72
CMTM4-204ENST00000563952 FKBP1AP62942 108 aaKnown RBP38.28■■■■□ 3.72
CMTM4-204ENST00000563952 FAM205AQ6ZU69 1335 aa38.28■■■■□ 3.72
CMTM4-204ENST00000563952 WNT10BO00744 389 aa38.27■■■■□ 3.72
CMTM4-204ENST00000563952 FGFR2P21802 821 aa38.27■■■■□ 3.72
CMTM4-204ENST00000563952 SLC5A1P13866 664 aa38.26■■■■□ 3.72
CMTM4-204ENST00000563952 COPRSQ9NQ92 184 aa38.26■■■■□ 3.72
CMTM4-204ENST00000563952 CEP126Q9P2H0 1117 aa38.26■■■■□ 3.72
CMTM4-204ENST00000563952 SCAF8Q9UPN6 1271 aaKnown RBP38.26■■■■□ 3.72
CMTM4-204ENST00000563952 FRAT2O75474 233 aaPredicted RBP38.25■■■■□ 3.71
CMTM4-204ENST00000563952 RLBP1P12271 317 aa38.25■■■■□ 3.71
CMTM4-204ENST00000563952 BCAMP50895 628 aa38.25■■■■□ 3.71
CMTM4-204ENST00000563952 MTX1Q13505 466 aa38.25■■■■□ 3.71
CMTM4-204ENST00000563952 ITPRIPQ8IWB1 547 aa38.25■■■■□ 3.71
CMTM4-204ENST00000563952 PITPNM2Q9BZ72 1349 aa38.25■■■■□ 3.71
CMTM4-204ENST00000563952 IL15P40933 162 aaPredicted RBP38.24■■■■□ 3.71
CMTM4-204ENST00000563952 MFSD14BQ5SR56 506 aa38.24■■■■□ 3.71
CMTM4-204ENST00000563952 LPIN2Q92539 896 aa38.24■■■■□ 3.71
CMTM4-204ENST00000563952 CHAF1AQ13111 956 aaPredicted RBP38.23■■■■□ 3.71
CMTM4-204ENST00000563952 GRM1Q13255 1194 aa38.23■■■■□ 3.71
CMTM4-204ENST00000563952 SAPCD2Q86UD0 394 aa38.23■■■■□ 3.71
CMTM4-204ENST00000563952 CDCA5Q96FF9 252 aa38.23■■■■□ 3.71
CMTM4-204ENST00000563952 DLGAP5Q15398 846 aa38.22■■■■□ 3.71
CMTM4-204ENST00000563952 WDR33Q9C0J8 1336 aaKnown RBP38.21■■■■□ 3.71
CMTM4-204ENST00000563952 ATP2B3Q16720 1220 aa38.21■■■■□ 3.71
CMTM4-204ENST00000563952 CYP4F22Q6NT55 531 aa38.2■■■■□ 3.71
CMTM4-204ENST00000563952 CAPNS2Q96L46 248 aa38.2■■■■□ 3.71
CMTM4-204ENST00000563952 ARAP2Q8WZ64 1704 aa38.19■■■■□ 3.7
CMTM4-204ENST00000563952 HSPA1AP0DMV8 641 aaKnown RBP38.19■■■■□ 3.7
CMTM4-204ENST00000563952 HSPA1BP0DMV9 641 aaKnown RBP38.19■■■■□ 3.7
CMTM4-204ENST00000563952 ZBED3Q96IU2 234 aaPredicted RBP38.19■■■■□ 3.7
CMTM4-204ENST00000563952 GBA2Q9HCG7 927 aaPredicted RBP38.19■■■■□ 3.7
CMTM4-204ENST00000563952 CFAP100Q494V2 611 aa38.18■■■■□ 3.7
CMTM4-204ENST00000563952 C2orf69Q8N8R5 385 aa38.18■■■■□ 3.7
CMTM4-204ENST00000563952 PCDHAC2Q9Y5I4 1007 aa38.18■■■■□ 3.7
CMTM4-204ENST00000563952 PNMA6EA0A0J9YXQ4 647 aa38.17■■■■□ 3.7
CMTM4-204ENST00000563952 ECE1P42892 770 aa38.17■■■■□ 3.7
CMTM4-204ENST00000563952 RBM5P52756 815 aaKnown RBP eCLIP38.17■■■■□ 3.7
CMTM4-204ENST00000563952 PANK1Q8TE04 598 aa38.17■■■■□ 3.7
CMTM4-204ENST00000563952 TTF2Q9UNY4 1162 aaKnown RBP38.17■■■■□ 3.7
CMTM4-204ENST00000563952 C1orf115Q9H7X2 142 aa38.16■■■■□ 3.7
CMTM4-204ENST00000563952 HUNKP57058 714 aa38.15■■■■□ 3.7
CMTM4-204ENST00000563952 MTMR14Q8NCE2 650 aa38.15■■■■□ 3.7
CMTM4-204ENST00000563952 PRAMEF18Q5VWM3 479 aa38.14■■■■□ 3.7
CMTM4-204ENST00000563952 RCAN3Q9UKA8 241 aa38.14■■■■□ 3.7
CMTM4-204ENST00000563952 MYH13Q9UKX3 1938 aa38.14■■■■□ 3.7
CMTM4-204ENST00000563952 APOBEC3FQ8IUX4 373 aaKnown RBP38.13■■■■□ 3.69
CMTM4-204ENST00000563952 TBC1D22AQ8WUA7 517 aa38.13■■■■□ 3.69
CMTM4-204ENST00000563952 HHIPL1Q96JK4 782 aa38.13■■■■□ 3.69
CMTM4-204ENST00000563952 SPDYE2BA6NHP3 402 aa38.12■■■■□ 3.69
CMTM4-204ENST00000563952 ZBTB7BO15156 539 aaPredicted RBP38.12■■■■□ 3.69
CMTM4-204ENST00000563952 SPDYE6P0CI01 402 aa38.12■■■■□ 3.69
CMTM4-204ENST00000563952 TFCP2Q12800 502 aa38.12■■■■□ 3.69
CMTM4-204ENST00000563952 ECM29Q5VYK3 1845 aa38.12■■■■□ 3.69
CMTM4-204ENST00000563952 GRIK5Q16478 980 aa38.11■■■■□ 3.69
CMTM4-204ENST00000563952 PRMT6Q96LA8 375 aaPredicted RBP38.11■■■■□ 3.69
CMTM4-204ENST00000563952 PCNTO95613 3336 aa38.11■■■■□ 3.69
CMTM4-204ENST00000563952 MYO1BO43795 1136 aa38.1■■■■□ 3.69
CMTM4-204ENST00000563952 CLRN2A0PK11 232 aa38.09■■■■□ 3.69
CMTM4-204ENST00000563952 MS4A1P11836 297 aa38.09■■■■□ 3.69
CMTM4-204ENST00000563952 GNL3LQ9NVN8 582 aaKnown RBP38.09■■■■□ 3.69
CMTM4-204ENST00000563952 SERPINA10Q9UK55 444 aa38.09■■■■□ 3.69
CMTM4-204ENST00000563952 AOC2O75106 756 aa38.08■■■■□ 3.69
CMTM4-204ENST00000563952 ADORA1P30542 326 aa38.08■■■■□ 3.69
CMTM4-204ENST00000563952 G3BP1Q13283 466 aaKnown RBP eCLIP38.08■■■■□ 3.69
CMTM4-204ENST00000563952 TIMM10P62072 90 aa38.07■■■■□ 3.68
CMTM4-204ENST00000563952 ATP8B2P98198 1209 aa38.07■■■■□ 3.68
CMTM4-204ENST00000563952 AKAP2Q9Y2D5 859 aa38.07■■■■□ 3.68
CMTM4-204ENST00000563952 THSD7BQ9C0I4 1608 aa38.07■■■■□ 3.68
CMTM4-204ENST00000563952 AOX1Q06278 1338 aa38.07■■■■□ 3.68
CMTM4-204ENST00000563952 PHKA1P46020 1223 aa38.06■■■■□ 3.68
CMTM4-204ENST00000563952 VEZTQ9HBM0 779 aa38.06■■■■□ 3.68
CMTM4-204ENST00000563952 COL1A1P02452 1464 aaPredicted RBP38.06■■■■□ 3.68
CMTM4-204ENST00000563952 CRKP46108 304 aa38.05■■■■□ 3.68
CMTM4-204ENST00000563952 POLA2Q14181 598 aa38.05■■■■□ 3.68
CMTM4-204ENST00000563952 AIDAQ96BJ3 306 aa38.05■■■■□ 3.68
CMTM4-204ENST00000563952 PAPPA2Q9BXP8 1791 aa38.04■■■■□ 3.68
CMTM4-204ENST00000563952 A0A1B0GUL7 405 aa38.04■■■■□ 3.68
CMTM4-204ENST00000563952 RGMBQ6NW40 437 aa38.04■■■■□ 3.68
CMTM4-204ENST00000563952 WDR66Q8TBY9 1149 aa38.04■■■■□ 3.68
CMTM4-204ENST00000563952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP38.04■■■■□ 3.68
CMTM4-204ENST00000563952 NF2P35240 595 aa38.03■■■■□ 3.68
CMTM4-204ENST00000563952 SSH3Q8TE77 659 aa38.03■■■■□ 3.68
CMTM4-204ENST00000563952 DEFB129Q9H1M3 183 aa38.03■■■■□ 3.68
CMTM4-204ENST00000563952 FKBP1BP68106 108 aa38.02■■■■□ 3.68
CMTM4-204ENST00000563952 MAP2K1Q02750 393 aaPredicted RBP38.02■■■■□ 3.68
CMTM4-204ENST00000563952 TTLL12Q14166 644 aaPredicted RBP38.02■■■■□ 3.68
CMTM4-204ENST00000563952 CCDC102BQ68D86 513 aa38.02■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms