RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
CLN6-203ENST00000563917 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 PRKG1Q13976 671 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 UBE4AQ14139 1066 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 PPP2R3BQ9Y5P8 575 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 PTPRCP08575 1304 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 SNAP23O00161 211 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
CLN6-203ENST00000563917 CFAP100Q494V2 611 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 MTMR14Q8NCE2 650 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 VEZTQ9HBM0 779 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
CLN6-203ENST00000563917 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
CLN6-203ENST00000563917 COL1A1P02452 1464 aaPredicted RBP12.01□□□□□ -0.49
CLN6-203ENST00000563917 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
CLN6-203ENST00000563917 TNFAIP1Q13829 316 aa12□□□□□ -0.49
CLN6-203ENST00000563917 METTL24Q5JXM2 366 aa12□□□□□ -0.49
CLN6-203ENST00000563917 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
CLN6-203ENST00000563917 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
CLN6-203ENST00000563917 NBPF7P0C2Y1 421 aaPredicted RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 CERS5Q8N5B7 392 aa11.99□□□□□ -0.49
CLN6-203ENST00000563917 MRPL50Q8N5N7 158 aaKnown RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 ZBED3Q96IU2 234 aaPredicted RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 TTF2Q9UNY4 1162 aaKnown RBP11.99□□□□□ -0.49
CLN6-203ENST00000563917 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
CLN6-203ENST00000563917 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
CLN6-203ENST00000563917 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
CLN6-203ENST00000563917 UTYO14607 1347 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 GYG1P46976 350 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
CLN6-203ENST00000563917 TNNI2P48788 182 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 INHBEP58166 350 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
CLN6-203ENST00000563917 CTU1Q7Z7A3 348 aaKnown RBP11.98□□□□□ -0.49
CLN6-203ENST00000563917 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
CLN6-203ENST00000563917 IRS2Q9Y4H2 1338 aa11.97□□□□□ -0.49
CLN6-203ENST00000563917 TM4SF4P48230 202 aa11.97□□□□□ -0.49
CLN6-203ENST00000563917 CHAF1AQ13111 956 aaPredicted RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 PKN2Q16513 984 aaKnown RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
CLN6-203ENST00000563917 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
CLN6-203ENST00000563917 FAM84BQ96KN1 310 aaPredicted RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 PRMT6Q96LA8 375 aaPredicted RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
CLN6-203ENST00000563917 RIPOR2Q9Y4F9 1068 aa11.97□□□□□ -0.49
CLN6-203ENST00000563917 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
CLN6-203ENST00000563917 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
CLN6-203ENST00000563917 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
CLN6-203ENST00000563917 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
CLN6-203ENST00000563917 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 OTUD7BQ6GQQ9 843 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 TMOD2Q9NZR1 351 aa11.96□□□□□ -0.49
CLN6-203ENST00000563917 ZNF646O15015 1829 aaPredicted RBP11.95□□□□□ -0.5
CLN6-203ENST00000563917 MAST3O60307 1309 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 PDE8BO95263 885 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
CLN6-203ENST00000563917 RASA3Q14644 834 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 MAP3K11Q16584 847 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 ANKRD13AQ8IZ07 590 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 A0A1B0GUL6 1792 aa11.95□□□□□ -0.5
CLN6-203ENST00000563917 FKTNO75072 461 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 SLC5A1P13866 664 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 CRKP46108 304 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 RGS19P49795 217 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 PUM3Q15397 648 aaKnown RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 DZIP1LQ8IYY4 767 aaKnown RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 TEKT1Q969V4 418 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
CLN6-203ENST00000563917 TDRD3Q9H7E2 651 aaKnown RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
CLN6-203ENST00000563917 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms