RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 HELLSQ9NRZ9 838 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 ZMYM1Q5SVZ6 1142 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 ZNF589Q86UQ0 364 aaPredicted RBP26.42■■□□□ 1.82
LINC01960-201ENST00000563759 MPNDQ8N594 471 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 POLLQ9UGP5 575 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 CCDC171Q6TFL3 1326 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 KIAA1551Q9HCM1 1747 aa26.41■■□□□ 1.82
LINC01960-201ENST00000563759 SLFNL1Q499Z3 407 aa26.41■■□□□ 1.82
LINC01960-201ENST00000563759 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
LINC01960-201ENST00000563759 SEC62Q99442 399 aaKnown RBP26.41■■□□□ 1.82
LINC01960-201ENST00000563759 MAP3K12Q12852 859 aa26.4■■□□□ 1.82
LINC01960-201ENST00000563759 SLC9C2Q5TAH2 1124 aa26.4■■□□□ 1.82
LINC01960-201ENST00000563759 DPP8Q6V1X1 898 aaPredicted RBP26.4■■□□□ 1.82
LINC01960-201ENST00000563759 MAST2Q6P0Q8 1798 aa26.4■■□□□ 1.82
LINC01960-201ENST00000563759 PDS5AQ29RF7 1337 aaKnown RBP26.4■■□□□ 1.82
LINC01960-201ENST00000563759 ADD2P35612 726 aa26.39■■□□□ 1.82
LINC01960-201ENST00000563759 CCDC129Q6ZRS4 1044 aa26.39■■□□□ 1.82
LINC01960-201ENST00000563759 MAST3O60307 1309 aa26.39■■□□□ 1.82
LINC01960-201ENST00000563759 APPBP2Q92624 585 aa26.38■■□□□ 1.81
LINC01960-201ENST00000563759 LRP2BPQ9P2M1 347 aa26.38■■□□□ 1.81
LINC01960-201ENST00000563759 ABCF2Q9UG63 623 aa26.38■■□□□ 1.81
LINC01960-201ENST00000563759 PTH1RQ03431 593 aa26.38■■□□□ 1.81
LINC01960-201ENST00000563759 IPO9Q96P70 1041 aaKnown RBP26.38■■□□□ 1.81
LINC01960-201ENST00000563759 ZNF219Q9P2Y4 722 aaPredicted RBP26.38■■□□□ 1.81
LINC01960-201ENST00000563759 WWC3Q9ULE0 1092 aa26.38■■□□□ 1.81
LINC01960-201ENST00000563759 BRCA1P38398 1863 aaKnown RBP26.37■■□□□ 1.81
LINC01960-201ENST00000563759 PDE6AP16499 860 aa26.37■■□□□ 1.81
LINC01960-201ENST00000563759 CHAF1AQ13111 956 aaPredicted RBP26.37■■□□□ 1.81
LINC01960-201ENST00000563759 OSBP2Q969R2 916 aa26.36■■□□□ 1.81
LINC01960-201ENST00000563759 KIF2CQ99661 725 aa26.36■■□□□ 1.81
LINC01960-201ENST00000563759 CHD4Q14839 1912 aa26.36■■□□□ 1.81
LINC01960-201ENST00000563759 UBE3CQ15386 1083 aa26.36■■□□□ 1.81
LINC01960-201ENST00000563759 ZNF532Q9HCE3 1301 aa26.36■■□□□ 1.81
LINC01960-201ENST00000563759 A0A0G2JLW4 131 aa26.35■■□□□ 1.81
LINC01960-201ENST00000563759 M0R2C6 588 aa26.35■■□□□ 1.81
LINC01960-201ENST00000563759 DPEP1P16444 411 aa26.35■■□□□ 1.81
LINC01960-201ENST00000563759 HSPA4P34932 840 aa26.35■■□□□ 1.81
LINC01960-201ENST00000563759 MAGEB6Q8N7X4 407 aa26.35■■□□□ 1.81
LINC01960-201ENST00000563759 ZBTB22O15209 634 aa26.34■■□□□ 1.81
LINC01960-201ENST00000563759 TTLL6Q8N841 843 aa26.34■■□□□ 1.81
LINC01960-201ENST00000563759 TDRD7Q8NHU6 1098 aaKnown RBP26.34■■□□□ 1.81
LINC01960-201ENST00000563759 RAI14Q9P0K7 980 aa26.34■■□□□ 1.81
LINC01960-201ENST00000563759 MAP4K1Q92918 833 aa26.34■■□□□ 1.81
LINC01960-201ENST00000563759 CD209Q9NNX6 404 aa26.34■■□□□ 1.81
LINC01960-201ENST00000563759 ANAPC15P60006 121 aa26.33■■□□□ 1.81
LINC01960-201ENST00000563759 EYA3Q99504 573 aa26.33■■□□□ 1.81
LINC01960-201ENST00000563759 ZC3H12CQ9C0D7 883 aaKnown RBP26.33■■□□□ 1.81
LINC01960-201ENST00000563759 PUS7LQ9H0K6 701 aaKnown RBP26.33■■□□□ 1.81
LINC01960-201ENST00000563759 PPP1R1BQ9UD71 204 aaPredicted RBP26.33■■□□□ 1.81
LINC01960-201ENST00000563759 PALD1Q9ULE6 856 aa26.33■■□□□ 1.81
LINC01960-201ENST00000563759 JAG2Q9Y219 1238 aa26.33■■□□□ 1.81
LINC01960-201ENST00000563759 RBM8AQ9Y5S9 174 aaKnown RBP26.33■■□□□ 1.81
LINC01960-201ENST00000563759 GOLGB1Q14789 3259 aaKnown RBP26.33■■□□□ 1.8
LINC01960-201ENST00000563759 RIMBP2O15034 1052 aa26.32■■□□□ 1.8
LINC01960-201ENST00000563759 TCRBV5S4A2TA0A5A2 114 aa26.32■■□□□ 1.8
LINC01960-201ENST00000563759 TGFB2P61812 414 aa26.32■■□□□ 1.8
LINC01960-201ENST00000563759 CC2D2BQ6DHV5 1058 aa26.32■■□□□ 1.8
LINC01960-201ENST00000563759 KLHL34Q8N239 644 aa26.32■■□□□ 1.8
LINC01960-201ENST00000563759 IL1R1P14778 569 aa26.31■■□□□ 1.8
LINC01960-201ENST00000563759 RABEP1Q15276 862 aa26.31■■□□□ 1.8
LINC01960-201ENST00000563759 WDR66Q8TBY9 1149 aa26.31■■□□□ 1.8
LINC01960-201ENST00000563759 C7orf43Q8WVR3 580 aa26.31■■□□□ 1.8
LINC01960-201ENST00000563759 SGIP1Q9BQI5 828 aa26.31■■□□□ 1.8
LINC01960-201ENST00000563759 GPAA1O43292 621 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 BECN1Q14457 450 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 ERICH6Q7L0X2 663 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 ZGPATQ8N5A5 531 aaKnown RBP26.3■■□□□ 1.8
LINC01960-201ENST00000563759 C21orf2O43822 256 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 KCNA3P22001 575 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 COA1Q9GZY4 146 aa26.3■■□□□ 1.8
LINC01960-201ENST00000563759 DAXXQ9UER7 740 aaPredicted RBP26.3■■□□□ 1.8
LINC01960-201ENST00000563759 AIDAQ96BJ3 306 aa26.29■■□□□ 1.8
LINC01960-201ENST00000563759 DSCC1Q9BVC3 393 aa26.29■■□□□ 1.8
LINC01960-201ENST00000563759 SALL1Q9NSC2 1324 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 SNED1Q8TER0 1413 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 G3V3G9 751 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 DCAF8Q5TAQ9 597 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 VPS53Q5VIR6 699 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 ILDR2Q71H61 639 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 U3KPZ7 1027 aaPredicted RBP26.28■■□□□ 1.8
LINC01960-201ENST00000563759 MYH2Q9UKX2 1941 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 HSPD1P10809 573 aaKnown RBP26.28■■□□□ 1.8
LINC01960-201ENST00000563759 PTGER2P43116 358 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 NECTIN1Q15223 517 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 RNF20Q5VTR2 975 aa26.28■■□□□ 1.8
LINC01960-201ENST00000563759 SPTY2D1Q68D10 685 aaPredicted RBP26.28■■□□□ 1.8
LINC01960-201ENST00000563759 ZKSCAN1P17029 563 aaPredicted RBP26.27■■□□□ 1.8
LINC01960-201ENST00000563759 CYP7A1P22680 504 aa26.27■■□□□ 1.8
LINC01960-201ENST00000563759 CCDC93Q567U6 631 aa26.27■■□□□ 1.8
LINC01960-201ENST00000563759 CREB3L3Q68CJ9 461 aa26.27■■□□□ 1.8
LINC01960-201ENST00000563759 PIM2Q9P1W9 311 aa26.27■■□□□ 1.8
LINC01960-201ENST00000563759 PRDX5P30044 214 aa26.26■■□□□ 1.79
LINC01960-201ENST00000563759 NAA16Q6N069 864 aaPredicted RBP26.26■■□□□ 1.79
LINC01960-201ENST00000563759 SNX14Q9Y5W7 946 aa26.26■■□□□ 1.79
LINC01960-201ENST00000563759 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
LINC01960-201ENST00000563759 DZIP1Q86YF9 867 aaKnown RBP26.25■■□□□ 1.79
LINC01960-201ENST00000563759 RTFDC1Q9BY42 306 aaPredicted RBP26.25■■□□□ 1.79
LINC01960-201ENST00000563759 CD2APQ9Y5K6 639 aa26.25■■□□□ 1.79
LINC01960-201ENST00000563759 LAMA4Q16363 1823 aa26.25■■□□□ 1.79
LINC01960-201ENST00000563759 SUPT20HQ8NEM7 779 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms