RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SAMD9LQ8IVG5 1584 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 DIP2BQ9P265 1576 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 DAPK1P53355 1430 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 AKNAQ7Z591 1439 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 KIAA1107Q9UPP5 1409 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 ZAP70P43403 619 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 HYAL2Q12891 473 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 PRSS36Q5K4E3 855 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 TTC39BQ5VTQ0 682 aaPredicted RBP6.78□□□□□ -1.32
CDR2-203ENST00000563573 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 OR13H1Q8NG92 308 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 MKNK1Q9BUB5 465 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
CDR2-203ENST00000563573 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
CDR2-203ENST00000563573 ARHGEF5Q12774 1597 aa6.78□□□□□ -1.32
CDR2-203ENST00000563573 ADGBQ8N7X0 1667 aa6.77□□□□□ -1.32
CDR2-203ENST00000563573 SCO2A0A1W2PP80 73 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 J3QW42 95 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 DLL1O00548 723 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
CDR2-203ENST00000563573 GDF6Q6KF10 455 aaPredicted RBP6.77□□□□□ -1.33
CDR2-203ENST00000563573 ERICH6Q7L0X2 663 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 SLC51AQ86UW1 340 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
CDR2-203ENST00000563573 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 NEO1Q92859 1461 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 CROCC2H7BZ55 1655 aa6.77□□□□□ -1.33
CDR2-203ENST00000563573 ABCC5O15440 1437 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 SETD5Q9C0A6 1442 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
CDR2-203ENST00000563573 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
CDR2-203ENST00000563573 TRIP4Q15650 581 aaPredicted RBP6.76□□□□□ -1.33
CDR2-203ENST00000563573 RRP7BPQ9NSQ0 103 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 ANKRD30AQ9BXX3 1397 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 ADGRL1O94910 1474 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 CCDC141Q6ZP82 1450 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 SCAPERQ9BY12 1400 aa6.76□□□□□ -1.33
CDR2-203ENST00000563573 MBD5Q9P267 1494 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 ROCK1Q13464 1354 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 SMNDC1O75940 238 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDR2-203ENST00000563573 PCSK2P16519 638 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 ATP2B4P23634 1241 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 PDE12Q6L8Q7 609 aaKnown RBP6.75□□□□□ -1.33
CDR2-203ENST00000563573 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 PPME1Q9Y570 386 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 ABCC1P33527 1531 aa6.75□□□□□ -1.33
CDR2-203ENST00000563573 SPAG9O60271 1321 aaKnown RBP6.75□□□□□ -1.33
CDR2-203ENST00000563573 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 NOS3P29474 1203 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 SCNN1AP37088 669 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 ARTNQ5T4W7 220 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 AFAP1Q8N556 730 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 TTC16Q8NEE8 873 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 CCER1Q8TC90 406 aaPredicted RBP6.74□□□□□ -1.33
CDR2-203ENST00000563573 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 ABI2Q9NYB9 513 aaPredicted RBP6.74□□□□□ -1.33
CDR2-203ENST00000563573 PTPRKQ15262 1439 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 MAST1Q9Y2H9 1570 aa6.74□□□□□ -1.33
CDR2-203ENST00000563573 DENND4BO75064 1496 aaPredicted RBP6.73□□□□□ -1.33
CDR2-203ENST00000563573 SHANK2Q9UPX8 1470 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 CAPN12Q6ZSI9 719 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 GCC2Q8IWJ2 1684 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 HFM1A2PYH4 1435 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 RTEL1-TNFRSF6BF6WH68 1400 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 C9orf84Q5VXU9 1444 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 ADGRL2O95490 1459 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 ZNF518AQ6AHZ1 1483 aa6.73□□□□□ -1.33
CDR2-203ENST00000563573 RAB3GAP2Q9H2M9 1393 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 ARHGEF12Q9NZN5 1544 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 PPRC1Q5VV67 1664 aaKnown RBP6.72□□□□□ -1.33
CDR2-203ENST00000563573 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
CDR2-203ENST00000563573 KIF4AO95239 1232 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 SETDB1Q15047 1291 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 FAM117BQ6P1L5 589 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
CDR2-203ENST00000563573 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 NAIPQ13075 1403 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 TRAPPC8Q9Y2L5 1435 aa6.72□□□□□ -1.33
CDR2-203ENST00000563573 F8W735 103 aaPredicted RBP6.71□□□□□ -1.34
CDR2-203ENST00000563573 RAPGEF3O95398 923 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 CDC27P30260 824 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 LRP8Q14114 963 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 CEP135Q66GS9 1140 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 XKR5Q6UX68 686 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 PMEPA1Q969W9 287 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 ELP3Q9H9T3 547 aa6.71□□□□□ -1.34
CDR2-203ENST00000563573 KIF15Q9NS87 1388 aa6.7□□□□□ -1.34
CDR2-203ENST00000563573 ZBTB39O15060 712 aa6.7□□□□□ -1.34
CDR2-203ENST00000563573 ZEB1P37275 1124 aaPredicted RBP6.7□□□□□ -1.34
CDR2-203ENST00000563573 FOXD4L6Q3SYB3 417 aaPredicted RBP6.7□□□□□ -1.34
CDR2-203ENST00000563573 ALKBH2Q6NS38 261 aa6.7□□□□□ -1.34
CDR2-203ENST00000563573 FOXD4L3Q6VB84 417 aaPredicted RBP6.7□□□□□ -1.34
CDR2-203ENST00000563573 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms