RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 IL1R1P14778 569 aa23.78■■□□□ 1.4
NME3-204ENST00000563498 INHBEP58166 350 aa23.78■■□□□ 1.4
NME3-204ENST00000563498 FOXO4P98177 505 aa23.78■■□□□ 1.4
NME3-204ENST00000563498 A0A1B0GUL6 1792 aa23.78■■□□□ 1.4
NME3-204ENST00000563498 VAMP4O75379 141 aa23.77■■□□□ 1.4
NME3-204ENST00000563498 TAF5LO75529 589 aa23.77■■□□□ 1.4
NME3-204ENST00000563498 ZNF804AQ7Z570 1209 aa23.77■■□□□ 1.4
NME3-204ENST00000563498 ECM29Q5VYK3 1845 aa23.77■■□□□ 1.4
NME3-204ENST00000563498 MANSC4A6NHS7 340 aaPredicted RBP23.76■■□□□ 1.39
NME3-204ENST00000563498 SNAP23O00161 211 aa23.76■■□□□ 1.39
NME3-204ENST00000563498 MYO1BO43795 1136 aa23.76■■□□□ 1.39
NME3-204ENST00000563498 PPP1R12BO60237 982 aaPredicted RBP23.76■■□□□ 1.39
NME3-204ENST00000563498 ZBTB48P10074 688 aaPredicted RBP23.76■■□□□ 1.39
NME3-204ENST00000563498 PCDH10Q9P2E7 1040 aa23.76■■□□□ 1.39
NME3-204ENST00000563498 SSC5DA1L4H1 1573 aa23.75■■□□□ 1.39
NME3-204ENST00000563498 BEND3Q5T5X7 828 aa23.75■■□□□ 1.39
NME3-204ENST00000563498 PRPF38BQ5VTL8 546 aaKnown RBP23.75■■□□□ 1.39
NME3-204ENST00000563498 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
NME3-204ENST00000563498 HELBQ8NG08 1087 aaPredicted RBP23.75■■□□□ 1.39
NME3-204ENST00000563498 SLC10A4Q96EP9 437 aa23.75■■□□□ 1.39
NME3-204ENST00000563498 LAMB1P07942 1786 aa23.75■■□□□ 1.39
NME3-204ENST00000563498 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
NME3-204ENST00000563498 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
NME3-204ENST00000563498 SUPT20HL1Q3ZLR7 823 aa23.74■■□□□ 1.39
NME3-204ENST00000563498 R3HDMLQ9H3Y0 253 aa23.74■■□□□ 1.39
NME3-204ENST00000563498 CFAP100Q494V2 611 aa23.73■■□□□ 1.39
NME3-204ENST00000563498 IFNL1Q8IU54 200 aa23.73■■□□□ 1.39
NME3-204ENST00000563498 FZD1Q9UP38 647 aa23.73■■□□□ 1.39
NME3-204ENST00000563498 CHMP3Q9Y3E7 222 aa23.73■■□□□ 1.39
NME3-204ENST00000563498 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
NME3-204ENST00000563498 LMBR1LQ6UX01 489 aa23.72■■□□□ 1.39
NME3-204ENST00000563498 WNK4Q96J92 1243 aa23.72■■□□□ 1.39
NME3-204ENST00000563498 PRMT6Q96LA8 375 aaPredicted RBP23.72■■□□□ 1.39
NME3-204ENST00000563498 F6X3S4 739 aa23.71■■□□□ 1.39
NME3-204ENST00000563498 F8W031 263 aaPredicted RBP23.71■■□□□ 1.39
NME3-204ENST00000563498 CCDC57Q2TAC2 916 aa23.71■■□□□ 1.39
NME3-204ENST00000563498 PCDHAC2Q9Y5I4 1007 aa23.71■■□□□ 1.39
NME3-204ENST00000563498 CLRN2A0PK11 232 aa23.7■■□□□ 1.38
NME3-204ENST00000563498 GRM8O00222 908 aa23.7■■□□□ 1.38
NME3-204ENST00000563498 LDHAL6AQ6ZMR3 332 aa23.7■■□□□ 1.38
NME3-204ENST00000563498 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
NME3-204ENST00000563498 FAM205AQ6ZU69 1335 aa23.69■■□□□ 1.38
NME3-204ENST00000563498 IREB2P48200 963 aaKnown RBP23.69■■□□□ 1.38
NME3-204ENST00000563498 EPHA10Q5JZY3 1008 aa23.69■■□□□ 1.38
NME3-204ENST00000563498 TAF7LQ5H9L4 462 aa23.68■■□□□ 1.38
NME3-204ENST00000563498 VEZTQ9HBM0 779 aa23.68■■□□□ 1.38
NME3-204ENST00000563498 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
NME3-204ENST00000563498 CNNM1Q9NRU3 951 aa23.68■■□□□ 1.38
NME3-204ENST00000563498 IGF2BP3O00425 579 aaKnown RBP eCLIP23.67■■□□□ 1.38
NME3-204ENST00000563498 NBPF12Q5TAG4 269 aaPredicted RBP23.67■■□□□ 1.38
NME3-204ENST00000563498 ZNF594Q96JF6 807 aaPredicted RBP23.67■■□□□ 1.38
NME3-204ENST00000563498 AOX1Q06278 1338 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.38
NME3-204ENST00000563498 TNFAIP1Q13829 316 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 UBE4AQ14139 1066 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 RASA3Q14644 834 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 OTUD7BQ6GQQ9 843 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 TDRD7Q8NHU6 1098 aaKnown RBP23.66■■□□□ 1.38
NME3-204ENST00000563498 SERPINA10Q9UK55 444 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 JAG2Q9Y219 1238 aa23.66■■□□□ 1.38
NME3-204ENST00000563498 PLIN1O60240 522 aa23.65■■□□□ 1.38
NME3-204ENST00000563498 USP2O75604 605 aaPredicted RBP23.65■■□□□ 1.38
NME3-204ENST00000563498 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
NME3-204ENST00000563498 MFSD14BQ5SR56 506 aa23.65■■□□□ 1.38
NME3-204ENST00000563498 C9orf78Q9NZ63 289 aaPredicted RBP23.65■■□□□ 1.38
NME3-204ENST00000563498 TRIM17Q9Y577 477 aa23.65■■□□□ 1.38
NME3-204ENST00000563498 TESPA1A2RU30 521 aaPredicted RBP23.64■■□□□ 1.37
NME3-204ENST00000563498 SPDYE2Q495Y8 402 aa23.64■■□□□ 1.37
NME3-204ENST00000563498 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
NME3-204ENST00000563498 OTOP1Q7RTM1 612 aa23.64■■□□□ 1.37
NME3-204ENST00000563498 HIBADHP31937 336 aaKnown RBP23.63■■□□□ 1.37
NME3-204ENST00000563498 GJA5P36382 358 aa23.63■■□□□ 1.37
NME3-204ENST00000563498 ERO1AQ96HE7 468 aa23.63■■□□□ 1.37
NME3-204ENST00000563498 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.63■■□□□ 1.37
NME3-204ENST00000563498 TTF2Q9UNY4 1162 aaKnown RBP23.63■■□□□ 1.37
NME3-204ENST00000563498 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
NME3-204ENST00000563498 ARAP2Q8WZ64 1704 aa23.62■■□□□ 1.37
NME3-204ENST00000563498 SRCIN1Q9C0H9 1055 aa23.62■■□□□ 1.37
NME3-204ENST00000563498 ZNF70Q9UC06 446 aaPredicted RBP23.62■■□□□ 1.37
NME3-204ENST00000563498 GYG1P46976 350 aa23.61■■□□□ 1.37
NME3-204ENST00000563498 CRHR2Q13324 411 aa23.61■■□□□ 1.37
NME3-204ENST00000563498 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
NME3-204ENST00000563498 SPINK5Q9NQ38 1064 aaPredicted RBP23.61■■□□□ 1.37
NME3-204ENST00000563498 OTOFQ9HC10 1997 aa23.6■■□□□ 1.37
NME3-204ENST00000563498 TEPSINQ96N21 525 aa23.6■■□□□ 1.37
NME3-204ENST00000563498 PTPN18Q99952 460 aa23.6■■□□□ 1.37
NME3-204ENST00000563498 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 HTTP42858 3142 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 DZIP1LQ8IYY4 767 aaKnown RBP23.59■■□□□ 1.37
NME3-204ENST00000563498 OPTNQ96CV9 577 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 KAZALD1Q96I82 304 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 TDRD3Q9H7E2 651 aaKnown RBP23.59■■□□□ 1.37
NME3-204ENST00000563498 PTPN22Q9Y2R2 807 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 RIPOR2Q9Y4F9 1068 aa23.59■■□□□ 1.37
NME3-204ENST00000563498 SLC4A10Q6U841 1118 aa23.58■■□□□ 1.37
NME3-204ENST00000563498 SUCLG2Q96I99 432 aa23.58■■□□□ 1.37
NME3-204ENST00000563498 PUS3Q9BZE2 481 aaKnown RBP23.58■■□□□ 1.37
NME3-204ENST00000563498 ELP3Q9H9T3 547 aa23.58■■□□□ 1.37
NME3-204ENST00000563498 UTYO14607 1347 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms