RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 MKRN1Q9UHC7 482 aaKnown RBP35.21■■■■□ 3.23
NME3-203ENST00000563367 IQSEC3Q9UPP2 1182 aaPredicted RBP35.21■■■■□ 3.23
NME3-203ENST00000563367 IFIT1P09914 478 aaKnown RBP35.2■■■■□ 3.23
NME3-203ENST00000563367 BCAMP50895 628 aa35.2■■■■□ 3.23
NME3-203ENST00000563367 FKBP1AP62942 108 aaKnown RBP35.2■■■■□ 3.23
NME3-203ENST00000563367 CAVIN4Q5BKX8 364 aa35.2■■■■□ 3.23
NME3-203ENST00000563367 KRT26Q7Z3Y9 468 aa35.2■■■■□ 3.23
NME3-203ENST00000563367 CEP126Q9P2H0 1117 aa35.2■■■■□ 3.23
NME3-203ENST00000563367 MYH13Q9UKX3 1938 aa35.2■■■■□ 3.22
NME3-203ENST00000563367 ADM5C9JUS6 153 aa35.19■■■■□ 3.22
NME3-203ENST00000563367 NBPF9Q3BBW0 867 aa35.19■■■■□ 3.22
NME3-203ENST00000563367 VPS37DQ86XT2 251 aa35.19■■■■□ 3.22
NME3-203ENST00000563367 C1orf115Q9H7X2 142 aa35.19■■■■□ 3.22
NME3-203ENST00000563367 ARAP2Q8WZ64 1704 aa35.18■■■■□ 3.22
NME3-203ENST00000563367 ANGEL2Q5VTE6 544 aaKnown RBP35.18■■■■□ 3.22
NME3-203ENST00000563367 LPIN2Q92539 896 aa35.18■■■■□ 3.22
NME3-203ENST00000563367 CNTNAP1P78357 1384 aa35.17■■■■□ 3.22
NME3-203ENST00000563367 CELF2O95319 508 aaKnown RBP35.17■■■■□ 3.22
NME3-203ENST00000563367 SLC5A1P13866 664 aa35.17■■■■□ 3.22
NME3-203ENST00000563367 MMP14P50281 582 aa35.17■■■■□ 3.22
NME3-203ENST00000563367 HDAC9Q9UKV0 1011 aa35.17■■■■□ 3.22
NME3-203ENST00000563367 F8W031 263 aaPredicted RBP35.16■■■■□ 3.22
NME3-203ENST00000563367 WNT10BO00744 389 aa35.16■■■■□ 3.22
NME3-203ENST00000563367 ATP2B3Q16720 1220 aa35.16■■■■□ 3.22
NME3-203ENST00000563367 JMYQ8N9B5 988 aa35.16■■■■□ 3.22
NME3-203ENST00000563367 ABT1Q9ULW3 272 aaKnown RBP35.16■■■■□ 3.22
NME3-203ENST00000563367 ZNF408Q9H9D4 720 aa35.15■■■■□ 3.22
NME3-203ENST00000563367 MFSD14BQ5SR56 506 aa35.14■■■■□ 3.22
NME3-203ENST00000563367 PCNTO95613 3336 aa35.13■■■■□ 3.21
NME3-203ENST00000563367 ATP8B2P98198 1209 aa35.13■■■■□ 3.21
NME3-203ENST00000563367 SULF1Q8IWU6 871 aa35.13■■■■□ 3.21
NME3-203ENST00000563367 ZBED3Q96IU2 234 aaPredicted RBP35.13■■■■□ 3.21
NME3-203ENST00000563367 SCAF8Q9UPN6 1271 aaKnown RBP35.13■■■■□ 3.21
NME3-203ENST00000563367 ECM29Q5VYK3 1845 aa35.13■■■■□ 3.21
NME3-203ENST00000563367 MS4A1P11836 297 aa35.12■■■■□ 3.21
NME3-203ENST00000563367 CHAF1AQ13111 956 aaPredicted RBP35.12■■■■□ 3.21
NME3-203ENST00000563367 PCDHAC2Q9Y5I4 1007 aa35.12■■■■□ 3.21
NME3-203ENST00000563367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.12■■■■□ 3.21
NME3-203ENST00000563367 PITPNM2Q9BZ72 1349 aa35.11■■■■□ 3.21
NME3-203ENST00000563367 RASSF10A6NK89 507 aa35.11■■■■□ 3.21
NME3-203ENST00000563367 TFCP2Q12800 502 aa35.11■■■■□ 3.21
NME3-203ENST00000563367 POLA2Q14181 598 aa35.11■■■■□ 3.21
NME3-203ENST00000563367 FRAT2O75474 233 aaPredicted RBP35.1■■■■□ 3.21
NME3-203ENST00000563367 GRIK5Q16478 980 aa35.1■■■■□ 3.21
NME3-203ENST00000563367 DEFB115Q30KQ5 88 aa35.1■■■■□ 3.21
NME3-203ENST00000563367 SSH3Q8TE77 659 aa35.09■■■■□ 3.21
NME3-203ENST00000563367 TLL2Q9Y6L7 1015 aa35.09■■■■□ 3.21
NME3-203ENST00000563367 ADORA1P30542 326 aa35.08■■■■□ 3.21
NME3-203ENST00000563367 VEGFBP49765 207 aa35.08■■■■□ 3.21
NME3-203ENST00000563367 DLGAP5Q15398 846 aa35.08■■■■□ 3.21
NME3-203ENST00000563367 MTMR14Q8NCE2 650 aa35.08■■■■□ 3.21
NME3-203ENST00000563367 TIMM10P62072 90 aa35.07■■■■□ 3.2
NME3-203ENST00000563367 MVPQ14764 893 aaKnown RBP35.07■■■■□ 3.2
NME3-203ENST00000563367 CFAP100Q494V2 611 aa35.07■■■■□ 3.2
NME3-203ENST00000563367 CDCA5Q96FF9 252 aa35.07■■■■□ 3.2
NME3-203ENST00000563367 YTHDC1Q96MU7 727 aaKnown RBP35.07■■■■□ 3.2
NME3-203ENST00000563367 TTF2Q9UNY4 1162 aaKnown RBP35.07■■■■□ 3.2
NME3-203ENST00000563367 COG6Q9Y2V7 657 aa35.07■■■■□ 3.2
NME3-203ENST00000563367 COL1A1P02452 1464 aaPredicted RBP35.06■■■■□ 3.2
NME3-203ENST00000563367 G3BP1Q13283 466 aaKnown RBP eCLIP35.06■■■■□ 3.2
NME3-203ENST00000563367 SAPCD2Q86UD0 394 aa35.06■■■■□ 3.2
NME3-203ENST00000563367 PHKA1P46020 1223 aa35.04■■■■□ 3.2
NME3-203ENST00000563367 TBC1D22AQ8WUA7 517 aa35.04■■■■□ 3.2
NME3-203ENST00000563367 PRMT6Q96LA8 375 aaPredicted RBP35.04■■■■□ 3.2
NME3-203ENST00000563367 AOX1Q06278 1338 aa35.04■■■■□ 3.2
NME3-203ENST00000563367 A0A1B0GUL7 405 aa35.03■■■■□ 3.2
NME3-203ENST00000563367 C20orf194Q5TEA3 1177 aa35.03■■■■□ 3.2
NME3-203ENST00000563367 CEP85Q6P2H3 762 aa35.03■■■■□ 3.2
NME3-203ENST00000563367 AKAP2Q9Y2D5 859 aa35.03■■■■□ 3.2
NME3-203ENST00000563367 SPDYE2BA6NHP3 402 aa35.02■■■■□ 3.2
NME3-203ENST00000563367 SPDYE6P0CI01 402 aa35.02■■■■□ 3.2
NME3-203ENST00000563367 PRAMEF18Q5VWM3 479 aa35.01■■■■□ 3.2
NME3-203ENST00000563367 CCDC102BQ68D86 513 aa35.01■■■■□ 3.2
NME3-203ENST00000563367 XAGE2Q96GT9 111 aa35.01■■■■□ 3.2
NME3-203ENST00000563367 RBM5P52756 815 aaKnown RBP eCLIP35■■■■□ 3.19
NME3-203ENST00000563367 GBA2Q9HCG7 927 aaPredicted RBP35■■■■□ 3.19
NME3-203ENST00000563367 GNL3LQ9NVN8 582 aaKnown RBP35■■■■□ 3.19
NME3-203ENST00000563367 SERPINA10Q9UK55 444 aa35■■■■□ 3.19
NME3-203ENST00000563367 DDX19BQ9UMR2 479 aa35■■■■□ 3.19
NME3-203ENST00000563367 SURF6O75683 361 aaKnown RBP34.99■■■■□ 3.19
NME3-203ENST00000563367 CYP4F22Q6NT55 531 aa34.99■■■■□ 3.19
NME3-203ENST00000563367 APOBEC3FQ8IUX4 373 aaKnown RBP34.99■■■■□ 3.19
NME3-203ENST00000563367 WDR33Q9C0J8 1336 aaKnown RBP34.99■■■■□ 3.19
NME3-203ENST00000563367 PAXIP1Q6ZW49 1069 aaPredicted RBP34.98■■■■□ 3.19
NME3-203ENST00000563367 CAPNS2Q96L46 248 aa34.98■■■■□ 3.19
NME3-203ENST00000563367 ZBTB40Q9NUA8 1239 aa34.98■■■■□ 3.19
NME3-203ENST00000563367 CLRN2A0PK11 232 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 CRKP46108 304 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 PDE3AQ14432 1141 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 C2orf69Q8N8R5 385 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 WDR66Q8TBY9 1149 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 NEUROD6Q96NK8 337 aa34.97■■■■□ 3.19
NME3-203ENST00000563367 NOP58Q9Y2X3 529 aaKnown RBP34.97■■■■□ 3.19
NME3-203ENST00000563367 HUNKP57058 714 aa34.96■■■■□ 3.19
NME3-203ENST00000563367 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.96■■■■□ 3.19
NME3-203ENST00000563367 SEMA3EO15041 775 aa34.95■■■■□ 3.19
NME3-203ENST00000563367 OS9Q13438 667 aaPredicted RBP34.95■■■■□ 3.19
NME3-203ENST00000563367 HHIPL1Q96JK4 782 aa34.95■■■■□ 3.19
NME3-203ENST00000563367 DENND2AQ9ULE3 1009 aa34.95■■■■□ 3.19
NME3-203ENST00000563367 SUGT1Q9Y2Z0 365 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms