RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 MYOZ2Q9NPC6 264 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 SCAF8Q9UPN6 1271 aaKnown RBP13.01□□□□□ -0.33
SNX29-202ENST00000563308 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
SNX29-202ENST00000563308 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 IL16Q14005 1332 aa13□□□□□ -0.33
SNX29-202ENST00000563308 IGKV5-2P06315 115 aa13□□□□□ -0.33
SNX29-202ENST00000563308 CCL5P13501 91 aa13□□□□□ -0.33
SNX29-202ENST00000563308 CAPN2P17655 700 aa13□□□□□ -0.33
SNX29-202ENST00000563308 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
SNX29-202ENST00000563308 WNK4Q96J92 1243 aa13□□□□□ -0.33
SNX29-202ENST00000563308 ZNF646O15015 1829 aaPredicted RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 VIL1P09327 827 aaKnown RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 USP17L8P0C7I0 530 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 HOXD10P28358 340 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 ZNF280AP59817 542 aaPredicted RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 GPSM2P81274 684 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 TAF1CQ15572 869 aaPredicted RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 G2E3Q7L622 706 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 RAET1EQ8TD07 263 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
SNX29-202ENST00000563308 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 LAMA3Q16787 3333 aa12.99□□□□□ -0.33
SNX29-202ENST00000563308 VCANP13611 3396 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 LDLRAD1Q5T700 205 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 C7orf61Q8IZ16 206 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
SNX29-202ENST00000563308 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 ZMYND8Q9ULU4 1186 aaPredicted RBP12.98□□□□□ -0.33
SNX29-202ENST00000563308 ANP32CO43423 234 aa12.97□□□□□ -0.33
SNX29-202ENST00000563308 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
SNX29-202ENST00000563308 GRK4P32298 578 aa12.97□□□□□ -0.33
SNX29-202ENST00000563308 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
SNX29-202ENST00000563308 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
SNX29-202ENST00000563308 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 PDE8AO60658 829 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 CAP1Q01518 475 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 RSBN1LQ6PCB5 846 aaPredicted RBP12.96□□□□□ -0.33
SNX29-202ENST00000563308 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
SNX29-202ENST00000563308 PODXL2Q9NZ53 605 aa12.96□□□□□ -0.33
SNX29-202ENST00000563308 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
SNX29-202ENST00000563308 SGPL1O95470 568 aa12.95□□□□□ -0.34
SNX29-202ENST00000563308 MAGEA10P43363 369 aaPredicted RBP12.95□□□□□ -0.34
SNX29-202ENST00000563308 CWF19L2Q2TBE0 894 aaKnown RBP12.95□□□□□ -0.34
SNX29-202ENST00000563308 ALYREFQ86V81 257 aaKnown RBP12.95□□□□□ -0.34
SNX29-202ENST00000563308 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
SNX29-202ENST00000563308 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
SNX29-202ENST00000563308 CCDC85AQ96PX6 553 aaPredicted RBP12.95□□□□□ -0.34
SNX29-202ENST00000563308 CDX2Q99626 313 aaPredicted RBP12.95□□□□□ -0.34
SNX29-202ENST00000563308 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
SNX29-202ENST00000563308 UNCXA6NJT0 531 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 VAMP4O75379 141 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
SNX29-202ENST00000563308 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 NECAB2Q7Z6G3 386 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
SNX29-202ENST00000563308 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
SNX29-202ENST00000563308 SPTBN5Q9NRC6 3674 aaKnown RBP12.94□□□□□ -0.34
SNX29-202ENST00000563308 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
SNX29-202ENST00000563308 H7C1W4 665 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 FOSL2P15408 326 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 SYN1P17600 705 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 CTSWP56202 376 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 LACTBP83111 547 aaPredicted RBP12.93□□□□□ -0.34
SNX29-202ENST00000563308 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
SNX29-202ENST00000563308 FLIIQ13045 1269 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
SNX29-202ENST00000563308 CASP7P55210 303 aa12.92□□□□□ -0.34
SNX29-202ENST00000563308 NBPF9Q3BBW0 867 aa12.92□□□□□ -0.34
SNX29-202ENST00000563308 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
SNX29-202ENST00000563308 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 UFL1O94874 794 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
SNX29-202ENST00000563308 NEXNQ0ZGT2 675 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 GCKRQ14397 625 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms