RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 BSNDQ8WZ55 320 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 ZNF587Q96SQ5 575 aaPredicted RBP9.34□□□□□ -0.91
LINC00557-201ENST00000563184 ZNF576Q9H609 170 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 SCAMP3O14828 347 aaKnown RBP9.33□□□□□ -0.92
LINC00557-201ENST00000563184 PTPRAP18433 802 aa9.33□□□□□ -0.92
LINC00557-201ENST00000563184 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
LINC00557-201ENST00000563184 SH2B1Q9NRF2 756 aaPredicted RBP9.33□□□□□ -0.92
LINC00557-201ENST00000563184 TCF3P15923 654 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 EPHA1P21709 976 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 FANCCQ00597 558 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 FAAP100Q0VG06 881 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
LINC00557-201ENST00000563184 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 PRDM6Q9NQX0 595 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
LINC00557-201ENST00000563184 LILRB5O75023 590 aa9.31□□□□□ -0.92
LINC00557-201ENST00000563184 FBXO24O75426 580 aa9.31□□□□□ -0.92
LINC00557-201ENST00000563184 GDF11O95390 407 aa9.31□□□□□ -0.92
LINC00557-201ENST00000563184 ST13P50502 369 aaKnown RBP9.31□□□□□ -0.92
LINC00557-201ENST00000563184 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
LINC00557-201ENST00000563184 BEND7Q8N7W2 519 aaPredicted RBP9.31□□□□□ -0.92
LINC00557-201ENST00000563184 PPM1HQ9ULR3 514 aa9.31□□□□□ -0.92
LINC00557-201ENST00000563184 NID1P14543 1247 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 AMPD1P23109 780 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 CDC27P30260 824 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 DGKGP49619 791 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 ZNF423Q2M1K9 1284 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 RPS26P11Q5JNZ5 115 aaPredicted RBP9.3□□□□□ -0.92
LINC00557-201ENST00000563184 METTL16Q86W50 562 aaKnown RBP9.3□□□□□ -0.92
LINC00557-201ENST00000563184 IL22RA1Q8N6P7 574 aa9.3□□□□□ -0.92
LINC00557-201ENST00000563184 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
LINC00557-201ENST00000563184 METTL5Q9NRN9 209 aaKnown RBP9.3□□□□□ -0.92
LINC00557-201ENST00000563184 TTF2Q9UNY4 1162 aaKnown RBP9.3□□□□□ -0.92
LINC00557-201ENST00000563184 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
LINC00557-201ENST00000563184 ZNF76P36508 570 aa9.28□□□□□ -0.92
LINC00557-201ENST00000563184 TPTE2Q6XPS3 522 aa9.28□□□□□ -0.92
LINC00557-201ENST00000563184 CACTIN-AS1Q8N1I8 211 aa9.28□□□□□ -0.92
LINC00557-201ENST00000563184 ZFYVE1Q9HBF4 777 aa9.28□□□□□ -0.92
LINC00557-201ENST00000563184 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
LINC00557-201ENST00000563184 ESRRAP11474 423 aaPredicted RBP9.27□□□□□ -0.93
LINC00557-201ENST00000563184 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
LINC00557-201ENST00000563184 HGSNATQ68CP4 663 aa9.27□□□□□ -0.93
LINC00557-201ENST00000563184 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
LINC00557-201ENST00000563184 H3BRJ5 948 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 SOX1O00570 391 aaPredicted RBP9.26□□□□□ -0.93
LINC00557-201ENST00000563184 ENC1O14682 589 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 B3GALT4O96024 378 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 CDC25BP30305 580 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 SNRPNP63162 240 aaKnown RBP9.26□□□□□ -0.93
LINC00557-201ENST00000563184 TXNDC11Q6PKC3 985 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 RNF34Q969K3 372 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 NECAB3Q96P71 396 aaPredicted RBP9.26□□□□□ -0.93
LINC00557-201ENST00000563184 TRIM56Q9BRZ2 755 aaKnown RBP9.26□□□□□ -0.93
LINC00557-201ENST00000563184 CNTNAP5Q8WYK1 1306 aa9.26□□□□□ -0.93
LINC00557-201ENST00000563184 LINC01387J3KSC0 135 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 TM4SF5O14894 197 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 CELA3AP09093 270 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 RANGAP1P46060 587 aaPredicted RBP9.25□□□□□ -0.93
LINC00557-201ENST00000563184 ZNF157P51786 506 aaPredicted RBP9.25□□□□□ -0.93
LINC00557-201ENST00000563184 LINC00114Q6XXX2 140 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 SV2BQ7L1I2 683 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 WFDC8Q8IUA0 241 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
LINC00557-201ENST00000563184 MKL2Q9ULH7 1088 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 PPME1Q9Y570 386 aa9.25□□□□□ -0.93
LINC00557-201ENST00000563184 PIK3R2O00459 728 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 PAGE1O75459 146 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 RAD51AP2Q09MP3 1159 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 IKBKEQ14164 716 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 CCDC85BQ15834 202 aaPredicted RBP9.24□□□□□ -0.93
LINC00557-201ENST00000563184 ERMP1Q7Z2K6 904 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 ALYREFQ86V81 257 aaKnown RBP9.24□□□□□ -0.93
LINC00557-201ENST00000563184 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
LINC00557-201ENST00000563184 TRIM11Q96F44 468 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
LINC00557-201ENST00000563184 GPN3Q9UHW5 284 aaPredicted RBP9.24□□□□□ -0.93
LINC00557-201ENST00000563184 CABP4P57796 275 aa9.23□□□□□ -0.93
LINC00557-201ENST00000563184 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
LINC00557-201ENST00000563184 NT5DC4Q86YG4 428 aa9.23□□□□□ -0.93
LINC00557-201ENST00000563184 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
LINC00557-201ENST00000563184 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
LINC00557-201ENST00000563184 FAM177BA6PVY3 158 aa9.22□□□□□ -0.93
LINC00557-201ENST00000563184 FSCN2O14926 492 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 IGHA1P01876 353 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 PIP4K2BP78356 416 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 HS2ST1Q7LGA3 356 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 GALNT11Q8NCW6 608 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 STK35Q8TDR2 534 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 SOX17Q9H6I2 414 aaPredicted RBP9.21□□□□□ -0.94
LINC00557-201ENST00000563184 GGT7Q9UJ14 662 aa9.21□□□□□ -0.94
LINC00557-201ENST00000563184 F6X3S4 739 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 DEAF1O75398 565 aaPredicted RBP9.2□□□□□ -0.94
LINC00557-201ENST00000563184 MAP3K11Q16584 847 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 ZNF394Q53GI3 561 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 RASIP1Q5U651 963 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 SLC7A3Q8WY07 619 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms