RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	IER5L	Q5T953	404 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	ARMC9	Q7Z3E5	817 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	RIC3	Q7Z5B4	369 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	IFNL1	Q8IU54	200 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	OGFOD1	Q8N543	542 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	FAM212A	Q96EL1	285 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	COA1	Q9GZY4	146 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	PHAX	Q9H814	394 aa	Known RBP	10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	MANSC4	A6NHS7	340 aa	Predicted RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	SASH1	O94885	1247 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	CCT4	P50991	539 aa	Known RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	CTSW	P56202	376 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	GOLGA2	Q08379	1002 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	MKRN3	Q13064	507 aa	Known RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	TTLL12	Q14166	644 aa	Predicted RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	TXNRD3	Q86VQ6	643 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	MTMR14	Q8NCE2	650 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	TTLL11	Q8NHH1	800 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	CDC5L	Q99459	802 aa	Known RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	METTL22	Q9BUU2	404 aa	Predicted RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	MBIP	Q9NS73	344 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	CWC25	Q9NXE8	425 aa	Predicted RBP	10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	PTPN22	Q9Y2R2	807 aa		10.79	□□□□□ -0.68
CKLF-208	ENST00000563092	TESPA1	A2RU30	521 aa	Predicted RBP	10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	CAP1	Q01518	475 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	RALBP1	Q15311	655 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	RUNDC1	Q96C34	613 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	MYD88	Q99836	296 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	LEMD3	Q9Y2U8	911 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	TRIM17	Q9Y577	477 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	IRS2	Q9Y4H2	1338 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	SZT2	Q5T011	3432 aa		10.78	□□□□□ -0.68
CKLF-208	ENST00000563092	IGKV5-2	P06315	115 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	NEUROD2	Q15784	382 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	JARID2	Q92833	1246 aa	Predicted RBP	10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	WNK4	Q96J92	1243 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	DEFB129	Q9H1M3	183 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	GREM2	Q9H772	168 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	ANGEL1	Q9UNK9	670 aa	Known RBP	10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	LAS1L	Q9Y4W2	734 aa	Known RBP	10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	PPP2R3B	Q9Y5P8	575 aa		10.77	□□□□□ -0.69
CKLF-208	ENST00000563092	GJA5	P36382	358 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	TTLL5	Q6EMB2	1281 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	CCDC146	Q8IYE0	955 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	SLC10A4	Q96EP9	437 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	FAM163A	Q96GL9	167 aa	Predicted RBP	10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	ERO1A	Q96HE7	468 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	CLMN	Q96JQ2	1002 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	PTPN18	Q99952	460 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	FZD1	Q9UP38	647 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	ZNF804B	A4D1E1	1349 aa		10.76	□□□□□ -0.69
CKLF-208	ENST00000563092	RANBP2	P49792	3224 aa	Known RBP	10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	EN2	P19622	333 aa	Predicted RBP	10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	KLRK1	P26718	216 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	CRHR2	Q13324	411 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	PRKG1	Q13976	671 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	C15orf52	Q6ZUT6	534 aa	Known RBP	10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	KIAA0825	Q8IV33	1275 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	CERS5	Q8N5B7	392 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	ZNF333	Q96JL9	665 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	PLA2G12B	Q9BX93	195 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092	IFT57	Q9NWB7	429 aa		10.75	□□□□□ -0.69
CKLF-208	ENST00000563092		H7C1W4	665 aa		10.74	□□□□□ -0.69
CKLF-208	ENST00000563092	C8orf58	Q8NAV2	365 aa		10.74	□□□□□ -0.69
CKLF-208	ENST00000563092	CD99L2	Q8TCZ2	262 aa		10.74	□□□□□ -0.69
CKLF-208	ENST00000563092	KIAA0100	Q14667	2235 aa	Known RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	PPP1R12B	O60237	982 aa	Predicted RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	USP2	O75604	605 aa	Predicted RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	DDX58	O95786	925 aa	Known RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	CSF1R	P07333	972 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	CASP7	P55210	303 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	FKBP1A	P62942	108 aa	Known RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	GTF2I	P78347	998 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	SP3	Q02447	781 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	KSR2	Q6VAB6	950 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	MS4A4A	Q96JQ5	239 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	TMEM106C	Q9BVX2	250 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	ANKRD2	Q9GZV1	360 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	EFCC1	Q9HA90	598 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	CD209	Q9NNX6	404 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	ADAMTS8	Q9UP79	889 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	MAP3K2	Q9Y2U5	619 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	PCDHAC2	Q9Y5I4	1007 aa		10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.73	□□□□□ -0.69
CKLF-208	ENST00000563092	MYH3	P11055	1940 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	NEURL1B	A8MQ27	555 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	IL1R1	P14778	569 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	GNAI1	P63096	354 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	DLGAP5	Q15398	846 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	SUPT20HL1	Q3ZLR7	823 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	OTUD7B	Q6GQQ9	843 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	AOX1	Q06278	1338 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	ECM29	Q5VYK3	1845 aa		10.72	□□□□□ -0.69
CKLF-208	ENST00000563092	PI4KAP2	A4QPH2	592 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	CCDC30	Q5VVM6	783 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	ANKRD13A	Q8IZ07	590 aa		10.71	□□□□□ -0.69

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