RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 SYNGAP1Q96PV0 1343 aa8.74□□□□□ -1.01
TCF4-213ENST00000562543 CELF2O95319 508 aaKnown RBP8.73□□□□□ -1.01
TCF4-213ENST00000562543 RFC4P35249 363 aa8.73□□□□□ -1.01
TCF4-213ENST00000562543 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
TCF4-213ENST00000562543 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
TCF4-213ENST00000562543 TTC21BQ7Z4L5 1316 aa8.73□□□□□ -1.01
TCF4-213ENST00000562543 ARFGEF2Q9Y6D5 1785 aa8.73□□□□□ -1.01
TCF4-213ENST00000562543 KDRP35968 1356 aa8.73□□□□□ -1.01
TCF4-213ENST00000562543 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 FIGNL2A6NMB9 653 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
TCF4-213ENST00000562543 C21orf2O43822 256 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 CBLBQ13191 982 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 CACNA1SQ13698 1873 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
TCF4-213ENST00000562543 INTS3Q68E01 1043 aaKnown RBP8.71□□□□□ -1.02
TCF4-213ENST00000562543 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
TCF4-213ENST00000562543 PIGBQ92521 554 aa8.71□□□□□ -1.02
TCF4-213ENST00000562543 HDAC9Q9UKV0 1011 aa8.71□□□□□ -1.02
TCF4-213ENST00000562543 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 EN2P19622 333 aaPredicted RBP8.7□□□□□ -1.02
TCF4-213ENST00000562543 TM4SF1P30408 202 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 KRT76Q01546 638 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 KIF23Q02241 960 aaPredicted RBP8.7□□□□□ -1.02
TCF4-213ENST00000562543 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 CCDC116Q8IYX3 515 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 SYNE4Q8N205 404 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
TCF4-213ENST00000562543 ZNF296Q8WUU4 475 aaPredicted RBP8.7□□□□□ -1.02
TCF4-213ENST00000562543 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 CNTNAP4Q9C0A0 1308 aa8.7□□□□□ -1.02
TCF4-213ENST00000562543 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
TCF4-213ENST00000562543 MON2Q7Z3U7 1717 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 SLX4Q8IY92 1834 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 A0A1W2PPC1 479 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 RPS6KA4O75676 772 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
TCF4-213ENST00000562543 SRP68Q9UHB9 627 aaKnown RBP8.69□□□□□ -1.02
TCF4-213ENST00000562543 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 CARMIL3Q8ND23 1372 aa8.69□□□□□ -1.02
TCF4-213ENST00000562543 TTLL8A6PVC2 850 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
TCF4-213ENST00000562543 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
TCF4-213ENST00000562543 PTSQ03393 145 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 PPP1R26Q5T8A7 1209 aaPredicted RBP8.68□□□□□ -1.02
TCF4-213ENST00000562543 BICDL1Q6ZP65 573 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 TRMT44Q8IYL2 757 aaKnown RBP8.68□□□□□ -1.02
TCF4-213ENST00000562543 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 PCDH11XQ9BZA7 1347 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 PCDH11YQ9BZA8 1340 aa8.68□□□□□ -1.02
TCF4-213ENST00000562543 H0YIN7 160 aa8.67□□□□□ -1.02
TCF4-213ENST00000562543 GPC2Q8N158 579 aa8.67□□□□□ -1.02
TCF4-213ENST00000562543 DEFB123Q8N688 67 aa8.67□□□□□ -1.02
TCF4-213ENST00000562543 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
TCF4-213ENST00000562543 FZD9O00144 591 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 GSK3AP49840 483 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 HUNKP57058 714 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 USP50Q70EL3 339 aaPredicted RBP8.66□□□□□ -1.02
TCF4-213ENST00000562543 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 CSRNP1Q96S65 589 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 ASAP1Q9ULH1 1129 aa8.66□□□□□ -1.02
TCF4-213ENST00000562543 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.02
TCF4-213ENST00000562543 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
TCF4-213ENST00000562543 RGMBQ6NW40 437 aa8.65□□□□□ -1.02
TCF4-213ENST00000562543 Q7L0L9 218 aa8.65□□□□□ -1.02
TCF4-213ENST00000562543 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.02
TCF4-213ENST00000562543 CYP27B1O15528 508 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 EPS15P42566 896 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 SCNN1DP51172 638 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 MAP3K12Q12852 859 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 IP6K1Q92551 441 aa8.64□□□□□ -1.03
TCF4-213ENST00000562543 LTV1Q96GA3 475 aaPredicted RBP8.64□□□□□ -1.03
TCF4-213ENST00000562543 GLIS2Q9BZE0 524 aaPredicted RBP8.64□□□□□ -1.03
TCF4-213ENST00000562543 TMEM265A0A087WTH1 108 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
TCF4-213ENST00000562543 NR6A1Q15406 480 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 RNFT1Q5M7Z0 435 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 SOGA3Q5TF21 947 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 Q6ZVU0 165 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 ZNF622Q969S3 477 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■■■□□ 17.7
TCF4-213ENST00000562543 KCTD15Q96SI1 283 aaPredicted RBP8.63□□□□□ -1.03
TCF4-213ENST00000562543 ARHGAP9Q9BRR9 750 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 ZNF408Q9H9D4 720 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 ANKRD26Q9UPS8 1709 aa8.63□□□□□ -1.03
TCF4-213ENST00000562543 ITGAEP38570 1179 aa8.62□□□□□ -1.03
TCF4-213ENST00000562543 CTSOP43234 321 aaPredicted RBP8.62□□□□□ -1.03
TCF4-213ENST00000562543 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
TCF4-213ENST00000562543 ARMC5Q96C12 935 aa8.62□□□□□ -1.03
TCF4-213ENST00000562543 OCSTAMPQ9BR26 566 aa8.62□□□□□ -1.03
TCF4-213ENST00000562543 GPR25O00155 361 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms