RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ITGB5P18084 799 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 CES1P23141 567 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 ARL4DP49703 201 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 MSMPQ1L6U9 139 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 CCDC39Q9UFE4 941 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
DENND4A-205ENST00000562540 SRPK2P78362 688 aaKnown RBP6.8□□□□□ -1.32
DENND4A-205ENST00000562540 C1orf127Q8N9H9 656 aa6.8□□□□□ -1.32
DENND4A-205ENST00000562540 EDEM1Q92611 657 aa6.8□□□□□ -1.32
DENND4A-205ENST00000562540 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
DENND4A-205ENST00000562540 DZANK1Q9NVP4 752 aa6.8□□□□□ -1.32
DENND4A-205ENST00000562540 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
DENND4A-205ENST00000562540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.8□□□□□ -1.32
DENND4A-205ENST00000562540 NFKBIEO00221 500 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 PCSK2P16519 638 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 ATP2B4P23634 1241 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 DNM1Q05193 864 aaKnown RBP6.79□□□□□ -1.32
DENND4A-205ENST00000562540 C19orf57Q0VDD7 668 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 TTC16Q8NEE8 873 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 GIMAP7Q8NHV1 300 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 SOX13Q9UN79 622 aa6.79□□□□□ -1.32
DENND4A-205ENST00000562540 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 TRPA1O75762 1119 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 MAP4P27816 1152 aaKnown RBP6.78□□□□□ -1.32
DENND4A-205ENST00000562540 RXRBP28702 533 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 SPOCD1Q6ZMY3 1216 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 HHIPQ96QV1 700 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
DENND4A-205ENST00000562540 MEGF11A6BM72 1044 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 A6NHS1 94 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 C8orf34Q49A92 452 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 NUTM2GQ5VZR2 741 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 HGSNATQ68CP4 663 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 PMEPA1Q969W9 287 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 SLAIN2Q9P270 581 aa6.77□□□□□ -1.33
DENND4A-205ENST00000562540 PDGFAP04085 211 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 PRNPP04156 253 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 F13BP05160 661 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 FOSL1P15407 271 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 JUNBP17275 347 aaPredicted RBP6.76□□□□□ -1.33
DENND4A-205ENST00000562540 ZNF648Q5T619 568 aaPredicted RBP6.76□□□□□ -1.33
DENND4A-205ENST00000562540 TP53INP2Q8IXH6 220 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 TMEM102Q8N9M5 508 aaPredicted RBP6.76□□□□□ -1.33
DENND4A-205ENST00000562540 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 OSBPL1AQ9BXW6 950 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
DENND4A-205ENST00000562540 IKBKEQ14164 716 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 ZNF124Q15973 351 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 NOM1Q5C9Z4 860 aaKnown RBP6.75□□□□□ -1.33
DENND4A-205ENST00000562540 VSIG10LQ86VR7 867 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 SHISA5Q8N114 240 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 C12orf50Q8NA57 414 aaPredicted RBP6.75□□□□□ -1.33
DENND4A-205ENST00000562540 BSNDQ8WZ55 320 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 PBXIP1Q96AQ6 731 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 FBXL18Q96ME1 805 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 OSMRQ99650 979 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 CYP4F12Q9HCS2 524 aa6.75□□□□□ -1.33
DENND4A-205ENST00000562540 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
DENND4A-205ENST00000562540 MZF1P28698 734 aaPredicted RBP6.74□□□□□ -1.33
DENND4A-205ENST00000562540 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
DENND4A-205ENST00000562540 ZKSCAN3Q9BRR0 538 aa6.74□□□□□ -1.33
DENND4A-205ENST00000562540 TMPRSS13Q9BYE2 586 aa6.74□□□□□ -1.33
DENND4A-205ENST00000562540 LOC100289279A0A1B0GTE1 492 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 FAM95CA0A1B0GW59 222 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 TIAF1O95411 115 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 EDN3P14138 238 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 EIF1AXP47813 144 aaKnown RBP6.73□□□□□ -1.33
DENND4A-205ENST00000562540 USP11P51784 963 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.33
DENND4A-205ENST00000562540 PAOXQ6QHF9 649 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 VN1R5Q7Z5H4 357 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 CCER1Q8TC90 406 aaPredicted RBP6.73□□□□□ -1.33
DENND4A-205ENST00000562540 NXPE3Q969Y0 559 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
DENND4A-205ENST00000562540 EREGO14944 169 aa6.72□□□□□ -1.33
DENND4A-205ENST00000562540 PHACTR2O75167 634 aa6.72□□□□□ -1.33
DENND4A-205ENST00000562540 MPSTP25325 297 aa6.72□□□□□ -1.33
DENND4A-205ENST00000562540 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
DENND4A-205ENST00000562540 ASAP3Q8TDY4 903 aa6.72□□□□□ -1.33
DENND4A-205ENST00000562540 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
DENND4A-205ENST00000562540 PAPLNO95428 1278 aa6.71□□□□□ -1.34
DENND4A-205ENST00000562540 SNX29Q8TEQ0 813 aa6.71□□□□□ -1.34
DENND4A-205ENST00000562540 FBLIM1Q8WUP2 373 aa6.71□□□□□ -1.34
DENND4A-205ENST00000562540 METTL22Q9BUU2 404 aaPredicted RBP6.71□□□□□ -1.34
DENND4A-205ENST00000562540 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
DENND4A-205ENST00000562540 POLIQ9UNA4 740 aa6.71□□□□□ -1.34
DENND4A-205ENST00000562540 DLGAP3O95886 979 aa6.7□□□□□ -1.34
DENND4A-205ENST00000562540 DRD2P14416 443 aa6.7□□□□□ -1.34
DENND4A-205ENST00000562540 ALKBH2Q6NS38 261 aa6.7□□□□□ -1.34
DENND4A-205ENST00000562540 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
DENND4A-205ENST00000562540 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms