RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 SCAF8Q9UPN6 1271 aaKnown RBP13.88□□□□□ -0.19
TSC2-218ENST00000562474 PCDHAC2Q9Y5I4 1007 aa13.88□□□□□ -0.19
TSC2-218ENST00000562474 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 IL1R1P14778 569 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
TSC2-218ENST00000562474 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
TSC2-218ENST00000562474 MAP1SQ66K74 1059 aaPredicted RBP13.87□□□□□ -0.19
TSC2-218ENST00000562474 DLK2Q6UY11 383 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
TSC2-218ENST00000562474 LPIN2Q92539 896 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 XAGE2Q96GT9 111 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 TLR7Q9NYK1 1049 aaKnown RBP13.87□□□□□ -0.19
TSC2-218ENST00000562474 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
TSC2-218ENST00000562474 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
TSC2-218ENST00000562474 TOMM70O94826 608 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 GMLQ99445 158 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 CCDC8Q9H0W5 538 aaPredicted RBP13.86□□□□□ -0.19
TSC2-218ENST00000562474 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
TSC2-218ENST00000562474 SMARCA5O60264 1052 aaPredicted RBP13.85□□□□□ -0.19
TSC2-218ENST00000562474 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
TSC2-218ENST00000562474 PI16Q6UXB8 463 aa13.85□□□□□ -0.19
TSC2-218ENST00000562474 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
TSC2-218ENST00000562474 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
TSC2-218ENST00000562474 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
TSC2-218ENST00000562474 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
TSC2-218ENST00000562474 AOX1Q06278 1338 aa13.85□□□□□ -0.19
TSC2-218ENST00000562474 H7C1D1 291 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 HMMRO75330 724 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 HTRA3P83110 453 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 KIF4BQ2VIQ3 1234 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 MFSD14BQ5SR56 506 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
TSC2-218ENST00000562474 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
TSC2-218ENST00000562474 MYH7P12883 1935 aa13.84□□□□□ -0.19
TSC2-218ENST00000562474 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 RPS12P25398 132 aaKnown RBP13.83□□□□□ -0.2
TSC2-218ENST00000562474 SCARF1Q14162 830 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 GORABQ5T7V8 394 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 AACSQ86V21 672 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 AGBL3Q8NEM8 1001 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 RBM46Q8TBY0 533 aaKnown RBP13.83□□□□□ -0.2
TSC2-218ENST00000562474 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 DPF2Q92785 391 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 SNRKQ9NRH2 765 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.2
TSC2-218ENST00000562474 AKAP2Q9Y2D5 859 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
TSC2-218ENST00000562474 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 MAST2Q6P0Q8 1798 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 TRAF5O00463 557 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 RASGRF1Q13972 1273 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 LDHDQ86WU2 507 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 GLIS2Q9BZE0 524 aaPredicted RBP13.82□□□□□ -0.2
TSC2-218ENST00000562474 MYOZ2Q9NPC6 264 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 DOCK2Q92608 1830 aa13.82□□□□□ -0.2
TSC2-218ENST00000562474 NBPF9Q3BBW0 867 aa13.81□□□□□ -0.2
TSC2-218ENST00000562474 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
TSC2-218ENST00000562474 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
TSC2-218ENST00000562474 GGA3Q9NZ52 723 aa13.81□□□□□ -0.2
TSC2-218ENST00000562474 TTF2Q9UNY4 1162 aaKnown RBP13.81□□□□□ -0.2
TSC2-218ENST00000562474 ADM5C9JUS6 153 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 PRDX5P30044 214 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 MCAMP43121 646 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
TSC2-218ENST00000562474 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
TSC2-218ENST00000562474 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 MYO3BQ8WXR4 1341 aa13.8□□□□□ -0.2
TSC2-218ENST00000562474 CFAP100Q494V2 611 aa13.79□□□□□ -0.2
TSC2-218ENST00000562474 ANGEL2Q5VTE6 544 aaKnown RBP13.79□□□□□ -0.2
TSC2-218ENST00000562474 ERC1Q8IUD2 1116 aa13.79□□□□□ -0.2
TSC2-218ENST00000562474 CNTROBQ8N137 903 aa13.79□□□□□ -0.2
TSC2-218ENST00000562474 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
TSC2-218ENST00000562474 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
TSC2-218ENST00000562474 ABCF2Q9UG63 623 aa13.79□□□□□ -0.2
TSC2-218ENST00000562474 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 TSHZ3Q63HK5 1081 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 KIF1BPQ96EK5 621 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 GPR108Q9NPR9 543 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
TSC2-218ENST00000562474 WNT10BO00744 389 aa13.77□□□□□ -0.21
TSC2-218ENST00000562474 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
TSC2-218ENST00000562474 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
TSC2-218ENST00000562474 HSP90AB4PQ58FF6 505 aa13.77□□□□□ -0.21
TSC2-218ENST00000562474 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.21
TSC2-218ENST00000562474 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms