RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
CDH1-204ENST00000562118 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 G3V3G9 751 aa16.55■□□□□ 0.24
CDH1-204ENST00000562118 EPS15P42566 896 aa16.55■□□□□ 0.24
CDH1-204ENST00000562118 GTF2IP78347 998 aa16.55■□□□□ 0.24
CDH1-204ENST00000562118 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
CDH1-204ENST00000562118 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
CDH1-204ENST00000562118 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
CDH1-204ENST00000562118 EPHX2P34913 555 aa16.54■□□□□ 0.24
CDH1-204ENST00000562118 USP50Q70EL3 339 aaPredicted RBP16.54■□□□□ 0.24
CDH1-204ENST00000562118 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
CDH1-204ENST00000562118 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
CDH1-204ENST00000562118 PGAP2Q9UHJ9 254 aa16.54■□□□□ 0.24
CDH1-204ENST00000562118 SUGT1Q9Y2Z0 365 aa16.54■□□□□ 0.24
CDH1-204ENST00000562118 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
CDH1-204ENST00000562118 SHTN1A0MZ66 631 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
CDH1-204ENST00000562118 RASGRF1Q13972 1273 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 VPS37DQ86XT2 251 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 MTMR14Q8NCE2 650 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
CDH1-204ENST00000562118 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 DBNDD2Q9BQY9 259 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
CDH1-204ENST00000562118 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
CDH1-204ENST00000562118 TOMM70O94826 608 aa16.52■□□□□ 0.24
CDH1-204ENST00000562118 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.24
CDH1-204ENST00000562118 PNMA8AQ86V59 439 aaPredicted RBP16.52■□□□□ 0.24
CDH1-204ENST00000562118 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
CDH1-204ENST00000562118 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
CDH1-204ENST00000562118 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.24
CDH1-204ENST00000562118 USP17L8P0C7I0 530 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
CDH1-204ENST00000562118 MFSD14BQ5SR56 506 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 MRIQ9BWK5 157 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
CDH1-204ENST00000562118 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
CDH1-204ENST00000562118 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 POLR2AP24928 1970 aaKnown RBP16.5■□□□□ 0.23
CDH1-204ENST00000562118 IGSF3O75054 1194 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 EGFRP00533 1210 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 MCAMP43121 646 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
CDH1-204ENST00000562118 TRPM4Q8TD43 1214 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
CDH1-204ENST00000562118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH1-204ENST00000562118 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
CDH1-204ENST00000562118 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
CDH1-204ENST00000562118 SCARF1Q14162 830 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 GRIK5Q16478 980 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 AACSQ86V21 672 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
CDH1-204ENST00000562118 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
CDH1-204ENST00000562118 TRPM7Q96QT4 1865 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 H7C1D1 291 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 IGHDP01880 384 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 FSTL1Q12841 308 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 CCDC8Q9H0W5 538 aaPredicted RBP16.48■□□□□ 0.23
CDH1-204ENST00000562118 MYOZ2Q9NPC6 264 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 SERPINA10Q9UK55 444 aa16.48■□□□□ 0.23
CDH1-204ENST00000562118 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
CDH1-204ENST00000562118 KIF4BQ2VIQ3 1234 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 SAMD7Q7Z3H4 446 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 KIAA0825Q8IV33 1275 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
CDH1-204ENST00000562118 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 MYH7P12883 1935 aa16.47■□□□□ 0.23
CDH1-204ENST00000562118 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
CDH1-204ENST00000562118 CENPBP07199 599 aaPredicted RBP16.46■□□□□ 0.23
CDH1-204ENST00000562118 CCDC158Q5M9N0 1113 aa16.46■□□□□ 0.23
CDH1-204ENST00000562118 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
CDH1-204ENST00000562118 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
CDH1-204ENST00000562118 ZGPATQ8N5A5 531 aaKnown RBP16.46■□□□□ 0.23
CDH1-204ENST00000562118 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
CDH1-204ENST00000562118 MAST3O60307 1309 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 FOCADQ5VW36 1801 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 WNT10BO00744 389 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
CDH1-204ENST00000562118 PRDX5P30044 214 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 CHAF1AQ13111 956 aaPredicted RBP16.45■□□□□ 0.22
CDH1-204ENST00000562118 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 GAKO14976 1311 aa16.45■□□□□ 0.22
CDH1-204ENST00000562118 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms