RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
DENND4A-204ENST00000562028 USP17L7P0C7H9 530 aa9.42□□□□□ -0.9
DENND4A-204ENST00000562028 CABP4P57796 275 aa9.42□□□□□ -0.9
DENND4A-204ENST00000562028 RPS26P11Q5JNZ5 115 aaPredicted RBP9.42□□□□□ -0.9
DENND4A-204ENST00000562028 VN1R5Q7Z5H4 357 aa9.42□□□□□ -0.9
DENND4A-204ENST00000562028 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
DENND4A-204ENST00000562028 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
DENND4A-204ENST00000562028 KIAA1522Q9P206 1035 aaPredicted RBP9.42□□□□□ -0.9
DENND4A-204ENST00000562028 GNB5O14775 395 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 EPHA1P21709 976 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 BEND7Q8N7W2 519 aaPredicted RBP9.41□□□□□ -0.9
DENND4A-204ENST00000562028 ANKRD24Q8TF21 1146 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
DENND4A-204ENST00000562028 H3BRJ5 948 aa9.4□□□□□ -0.9
DENND4A-204ENST00000562028 CTSHP09668 335 aa9.4□□□□□ -0.9
DENND4A-204ENST00000562028 DMRTC2Q8IXT2 367 aaPredicted RBP9.4□□□□□ -0.9
DENND4A-204ENST00000562028 TRIM11Q96F44 468 aa9.4□□□□□ -0.9
DENND4A-204ENST00000562028 TRAPPC3LQ5T215 181 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 FAM117BQ6P1L5 589 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 DTWD1Q8N5C7 304 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 WNT8BQ93098 351 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 SRA1Q9HD15 236 aaKnown RBP9.39□□□□□ -0.91
DENND4A-204ENST00000562028 AKAP2Q9Y2D5 859 aa9.39□□□□□ -0.91
DENND4A-204ENST00000562028 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
DENND4A-204ENST00000562028 PCDH1Q08174 1060 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 IKBKEQ14164 716 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
DENND4A-204ENST00000562028 E9PSI1 815 aa9.37□□□□□ -0.91
DENND4A-204ENST00000562028 ST13P50502 369 aaKnown RBP9.37□□□□□ -0.91
DENND4A-204ENST00000562028 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
DENND4A-204ENST00000562028 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
DENND4A-204ENST00000562028 SCARF2Q96GP6 870 aaPredicted RBP9.37□□□□□ -0.91
DENND4A-204ENST00000562028 BACH2Q9BYV9 841 aa9.37□□□□□ -0.91
DENND4A-204ENST00000562028 SOX17Q9H6I2 414 aaPredicted RBP9.37□□□□□ -0.91
DENND4A-204ENST00000562028 NOP53Q9NZM5 478 aaKnown RBP9.37□□□□□ -0.91
DENND4A-204ENST00000562028 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
DENND4A-204ENST00000562028 EIF4EBP3O60516 100 aaPredicted RBP9.36□□□□□ -0.91
DENND4A-204ENST00000562028 B3GALT4O96024 378 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 ZNF423Q2M1K9 1284 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 LDLRAD1Q5T700 205 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 OSGEPQ9NPF4 335 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 SEC31BQ9NQW1 1179 aa9.36□□□□□ -0.91
DENND4A-204ENST00000562028 A0A0A0MRY4 1105 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 FSCN2O14926 492 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 RECKO95980 971 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 CDC25BP30305 580 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 ARL4DP49703 201 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 RAC1P63000 192 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 TSNAXIP1Q2TAA8 658 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 TXNDC11Q6PKC3 985 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
DENND4A-204ENST00000562028 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
DENND4A-204ENST00000562028 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
DENND4A-204ENST00000562028 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
DENND4A-204ENST00000562028 KLHL23Q8NBE8 558 aa9.34□□□□□ -0.91
DENND4A-204ENST00000562028 TMEM87AQ8NBN3 555 aa9.34□□□□□ -0.91
DENND4A-204ENST00000562028 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
DENND4A-204ENST00000562028 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
DENND4A-204ENST00000562028 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
DENND4A-204ENST00000562028 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
DENND4A-204ENST00000562028 C19orf57Q0VDD7 668 aa9.33□□□□□ -0.92
DENND4A-204ENST00000562028 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
DENND4A-204ENST00000562028 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
DENND4A-204ENST00000562028 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
DENND4A-204ENST00000562028 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
DENND4A-204ENST00000562028 TM4SF5O14894 197 aa9.32□□□□□ -0.92
DENND4A-204ENST00000562028 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
DENND4A-204ENST00000562028 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
DENND4A-204ENST00000562028 SLC7A3Q8WY07 619 aa9.32□□□□□ -0.92
DENND4A-204ENST00000562028 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
DENND4A-204ENST00000562028 NOC4LQ9BVI4 516 aaKnown RBP9.32□□□□□ -0.92
DENND4A-204ENST00000562028 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
DENND4A-204ENST00000562028 SCAMP3O14828 347 aaKnown RBP9.31□□□□□ -0.92
DENND4A-204ENST00000562028 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
DENND4A-204ENST00000562028 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
DENND4A-204ENST00000562028 GALNT11Q8NCW6 608 aa9.31□□□□□ -0.92
DENND4A-204ENST00000562028 FBXO24O75426 580 aa9.3□□□□□ -0.92
DENND4A-204ENST00000562028 CCDC85BQ15834 202 aaPredicted RBP9.3□□□□□ -0.92
DENND4A-204ENST00000562028 HGSNATQ68CP4 663 aa9.3□□□□□ -0.92
DENND4A-204ENST00000562028 KLHDC7BQ96G42 594 aa9.3□□□□□ -0.92
DENND4A-204ENST00000562028 CARD10Q9BWT7 1032 aa9.3□□□□□ -0.92
DENND4A-204ENST00000562028 METTL5Q9NRN9 209 aaKnown RBP9.3□□□□□ -0.92
DENND4A-204ENST00000562028 DLL1O00548 723 aa9.29□□□□□ -0.92
DENND4A-204ENST00000562028 ENC1O14682 589 aa9.29□□□□□ -0.92
DENND4A-204ENST00000562028 ELNP15502 786 aa9.29□□□□□ -0.92
DENND4A-204ENST00000562028 CD68P34810 354 aaPredicted RBP9.29□□□□□ -0.92
DENND4A-204ENST00000562028 ZNF157P51786 506 aaPredicted RBP9.29□□□□□ -0.92
DENND4A-204ENST00000562028 GSTM4Q03013 218 aa9.29□□□□□ -0.92
DENND4A-204ENST00000562028 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms