RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 IRS4O14654 1257 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-210ENST00000561817 RPS6KA4O75676 772 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 NTSR2O95665 410 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 IL15P40933 162 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-210ENST00000561817 CTSWP56202 376 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 KCNC4Q03721 635 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 LRRC24Q50LG9 513 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 PARP10Q53GL7 1025 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 CLEC4GQ6UXB4 293 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-210ENST00000561817 AK7Q96M32 723 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 PUS3Q9BZE2 481 aaKnown RBP7.97□□□□□ -1.13
CAPN3-210ENST00000561817 CCDC8Q9H0W5 538 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-210ENST00000561817 COL24A1Q17RW2 1714 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 RTL9Q8NET4 1388 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 ZNF609O15014 1411 aa7.96□□□□□ -1.13
CAPN3-210ENST00000561817 UBR3Q6ZT12 1888 aa7.96□□□□□ -1.13
CAPN3-210ENST00000561817 C4AP0C0L4 1744 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 QSER1Q2KHR3 1735 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 ERC2O15083 957 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 PDE8AO60658 829 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 IFIT2P09913 472 aaKnown RBP7.96□□□□□ -1.14
CAPN3-210ENST00000561817 ATP5JP18859 108 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 OSBPP22059 807 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 SLC4A3P48751 1232 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 PPP4CP60510 307 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 TMCO4Q5TGY1 634 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 SMIM5Q71RC9 77 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 SNX21Q969T3 373 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 DBNDD2Q9BQY9 259 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 GREM2Q9H772 168 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 SNRKQ9NRH2 765 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 TRMT112Q9UI30 125 aaKnown RBP7.96□□□□□ -1.14
CAPN3-210ENST00000561817 RIPOR2Q9Y4F9 1068 aa7.96□□□□□ -1.14
CAPN3-210ENST00000561817 COL4A1P02462 1669 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 SGSM2O43147 1006 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
CAPN3-210ENST00000561817 MAP4K4O95819 1239 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-210ENST00000561817 VGLL2Q8N8G2 317 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 TATDN2Q93075 761 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 RILPL2Q969X0 211 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 UTP14AQ9BVJ6 771 aaKnown RBP7.95□□□□□ -1.14
CAPN3-210ENST00000561817 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 CCNL1Q9UK58 526 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-210ENST00000561817 SH3TC1Q8TE82 1336 aa7.95□□□□□ -1.14
CAPN3-210ENST00000561817 SMAPO00193 183 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 ITGA6P23229 1130 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 TXNRD1Q16881 649 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 CCDC57Q2TAC2 916 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 SLC10A5Q5PT55 438 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 CASC1Q6TDU7 716 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 CNTROBQ8N137 903 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 EVI5LQ96CN4 794 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 GPATCH3Q96I76 525 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-210ENST00000561817 LSG1Q9H089 658 aaKnown RBP7.94□□□□□ -1.14
CAPN3-210ENST00000561817 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
CAPN3-210ENST00000561817 PNMA3Q9UL41 463 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 NIP7Q9Y221 180 aaKnown RBP eCLIP7.94□□□□□ -1.14
CAPN3-210ENST00000561817 CHMP3Q9Y3E7 222 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 CASZ1Q86V15 1759 aa7.94□□□□□ -1.14
CAPN3-210ENST00000561817 REC8O95072 547 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 CD2BP2O95400 341 aaKnown RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 TIMM10P62072 90 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 IFIT5Q13325 482 aaKnown RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 R3HDM1Q15032 1099 aaKnown RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 TBC1D9BQ66K14 1250 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 CCDC82Q8N4S0 544 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 FOXD4L4Q8WXT5 416 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 ARHGEF1Q92888 912 aaKnown RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 CCDC85AQ96PX6 553 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 CAMKK2Q96RR4 588 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 HAUS7Q99871 368 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 BOLA2Q9H3K6 86 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 ANTXR1Q9H6X2 564 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 CDHR5Q9HBB8 845 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 STK32BQ9NY57 414 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 SRP68Q9UHB9 627 aaKnown RBP7.93□□□□□ -1.14
CAPN3-210ENST00000561817 ZNF652Q9Y2D9 606 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 RFX7Q2KHR2 1363 aa7.93□□□□□ -1.14
CAPN3-210ENST00000561817 ARAP2Q8WZ64 1704 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 SPEF2Q9C093 1822 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 A0A1B0GUL7 405 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 ANKRD18BA2A2Z9 1011 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 GNPATO15228 680 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 FGFR2P21802 821 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 ADORA1P30542 326 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 SF3B3Q15393 1217 aaKnown RBP7.92□□□□□ -1.14
CAPN3-210ENST00000561817 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
CAPN3-210ENST00000561817 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms