RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 CC2D1AQ6P1N0 951 aaPredicted RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 TADA2BQ86TJ2 420 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 GPATCH11Q8N954 259 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 SPC24Q8NBT2 197 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 CCDC150Q8NCX0 1101 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 RABGGTAQ92696 567 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 MPHOSPH8Q99549 860 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 API5Q9BZZ5 524 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 SRCIN1Q9C0H9 1055 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 ACBD3Q9H3P7 528 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 DNAI1Q9UI46 699 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 TRAK1Q9UPV9 953 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 SLC27A5Q9Y2P5 690 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 ABCC4O15439 1325 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 XIRP1Q702N8 1843 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 ADGRL3Q9HAR2 1447 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 SETD1AO15047 1707 aaKnown RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 TNFRSF10AO00220 468 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 STX6O43752 255 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 TADA3O75528 432 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 F13A1P00488 732 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 ETF1P62495 437 aaKnown RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 ST5P78524 1137 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 NBPF5PQ86XG9 351 aaPredicted RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 SPATS2Q86XZ4 545 aaKnown RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 GTF3C6Q969F1 213 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 ITFG2Q969R8 447 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 TRERF1Q96PN7 1200 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 SCAND2PQ9GZW5 306 aaPredicted RBP8.44□□□□□ -1.06
CDH1-203ENST00000561751 CBX8Q9HC52 389 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 TERF2IPQ9NYB0 399 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 LMTK2Q8IWU2 1503 aa8.44□□□□□ -1.06
CDH1-203ENST00000561751 SRGAP3O43295 1099 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 SDSP20132 328 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 USP5P45974 858 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 GYS2P54840 703 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 CCZ1BP86790 482 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 CCZ1P86791 482 aaPredicted RBP8.43□□□□□ -1.06
CDH1-203ENST00000561751 ICA1Q05084 483 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 PSME1Q06323 249 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 CRYMQ14894 314 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 GIMAP6Q6P9H5 292 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 TEX13AQ9BXU3 409 aaPredicted RBP8.43□□□□□ -1.06
CDH1-203ENST00000561751 FUT8Q9BYC5 575 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 GBP3Q9H0R5 595 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 ST7Q9NRC1 585 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 CEP152O94986 1710 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 UBR1Q8IWV7 1749 aa8.43□□□□□ -1.06
CDH1-203ENST00000561751 POLR3GO15318 223 aaPredicted RBP8.42□□□□□ -1.06
CDH1-203ENST00000561751 MYO1BO43795 1136 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 ERLIN1O75477 346 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 LRMPQ12912 555 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 NEDD9Q14511 834 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 HDXQ7Z353 690 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 ANKRD18AQ8IVF6 992 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 SULF1Q8IWU6 871 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 SIRT2Q8IXJ6 389 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 ANKRD44Q8N8A2 993 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 FAM71BQ8TC56 605 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 CLSTN2Q9H4D0 955 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 VIPAS39Q9H9C1 493 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 PRDM9Q9NQV7 894 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 SH2B1Q9NRF2 756 aaPredicted RBP8.42□□□□□ -1.06
CDH1-203ENST00000561751 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
CDH1-203ENST00000561751 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
CDH1-203ENST00000561751 AOX1Q06278 1338 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 YTHDC2Q9H6S0 1430 aaKnown RBP8.42□□□□□ -1.06
CDH1-203ENST00000561751 SLIT1O75093 1534 aa8.42□□□□□ -1.06
CDH1-203ENST00000561751 MSH6P52701 1360 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 GOLGA6L19H0YKK7 550 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 DGAT1O75907 488 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 FMNL1O95466 1100 aaPredicted RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 PDCP20941 246 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 LMAN1P49257 510 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 ZNF165P49910 485 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 MRPL12P52815 198 aaKnown RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 KRT85P78386 507 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 PKDCCQ504Y2 493 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDH1-203ENST00000561751 RSRC2Q7L4I2 434 aaKnown RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 MORC1Q86VD1 984 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms