RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 NF2P35240 595 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 GTF2IP78347 998 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 KIAA0825Q8IV33 1275 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 ZNF296Q8WUU4 475 aaPredicted RBP10.7□□□□□ -0.7
PALB2-202ENST00000561514 SCAF8Q9UPN6 1271 aaKnown RBP10.7□□□□□ -0.7
PALB2-202ENST00000561514 MYH3P11055 1940 aa10.7□□□□□ -0.7
PALB2-202ENST00000561514 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 PTPN12Q05209 780 aaKnown RBP10.69□□□□□ -0.7
PALB2-202ENST00000561514 SREBF2Q12772 1141 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 IFIT5Q13325 482 aaKnown RBP10.69□□□□□ -0.7
PALB2-202ENST00000561514 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 ARMC9Q7Z3E5 817 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 HPS5Q9UPZ3 1129 aa10.69□□□□□ -0.7
PALB2-202ENST00000561514 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 GPR25O00155 361 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 SNAP23O00161 211 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 ZBTB48P10074 688 aaPredicted RBP10.68□□□□□ -0.7
PALB2-202ENST00000561514 EXOSC9Q06265 439 aaKnown RBP10.68□□□□□ -0.7
PALB2-202ENST00000561514 EPHA10Q5JZY3 1008 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 DEFB129Q9H1M3 183 aa10.68□□□□□ -0.7
PALB2-202ENST00000561514 TNRC18O15417 2968 aaPredicted RBP10.68□□□□□ -0.7
PALB2-202ENST00000561514 UTYO14607 1347 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 F6X3S4 739 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 GRM8O00222 908 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 ALDH1L1O75891 902 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 TBC1D8O95759 1140 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 KCNJ4P48050 445 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 DLGAP5Q15398 846 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 LMBR1LQ6UX01 489 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 MRS2Q9HD23 443 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 HTTP42858 3142 aa10.67□□□□□ -0.7
PALB2-202ENST00000561514 AOX1Q06278 1338 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 MANSC4A6NHS7 340 aaPredicted RBP10.66□□□□□ -0.7
PALB2-202ENST00000561514 TAF5LO75529 589 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 SOX10P56693 466 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 INHBEP58166 350 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 UBE4AQ14139 1066 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 TTLL12Q14166 644 aaPredicted RBP10.66□□□□□ -0.7
PALB2-202ENST00000561514 FBXO46Q6PJ61 603 aaPredicted RBP10.66□□□□□ -0.7
PALB2-202ENST00000561514 TDRD7Q8NHU6 1098 aaKnown RBP10.66□□□□□ -0.7
PALB2-202ENST00000561514 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 R3HDMLQ9H3Y0 253 aa10.66□□□□□ -0.7
PALB2-202ENST00000561514 FKTNO75072 461 aa10.65□□□□□ -0.7
PALB2-202ENST00000561514 RABL6Q3YEC7 729 aaPredicted RBP10.65□□□□□ -0.7
PALB2-202ENST00000561514 CFAP100Q494V2 611 aa10.65□□□□□ -0.7
PALB2-202ENST00000561514 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
PALB2-202ENST00000561514 WNK4Q96J92 1243 aa10.65□□□□□ -0.7
PALB2-202ENST00000561514 PRMT6Q96LA8 375 aaPredicted RBP10.65□□□□□ -0.7
PALB2-202ENST00000561514 SERPINA10Q9UK55 444 aa10.65□□□□□ -0.7
PALB2-202ENST00000561514 ANGEL1Q9UNK9 670 aaKnown RBP10.65□□□□□ -0.7
PALB2-202ENST00000561514 PCDHAC2Q9Y5I4 1007 aa10.65□□□□□ -0.7
PALB2-202ENST00000561514 AKAP11Q9UKA4 1901 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 SPEF2Q9C093 1822 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 TESPA1A2RU30 521 aaPredicted RBP10.64□□□□□ -0.71
PALB2-202ENST00000561514 MYO1BO43795 1136 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 PPP1R12BO60237 982 aaPredicted RBP10.64□□□□□ -0.71
PALB2-202ENST00000561514 CCDC57Q2TAC2 916 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 SUPT20HL1Q3ZLR7 823 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 PRPF38BQ5VTL8 546 aaKnown RBP10.64□□□□□ -0.71
PALB2-202ENST00000561514 LDHAL6AQ6ZMR3 332 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 IFNL1Q8IU54 200 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 CLMNQ96JQ2 1002 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 RIPOR2Q9Y4F9 1068 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 A0A1B0GUL6 1792 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 LAMB1P07942 1786 aa10.64□□□□□ -0.71
PALB2-202ENST00000561514 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 IGF2BP3O00425 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
PALB2-202ENST00000561514 GJA5P36382 358 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
PALB2-202ENST00000561514 RASA3Q14644 834 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
PALB2-202ENST00000561514 VGLL2Q8N8G2 317 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 SLC10A4Q96EP9 437 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 SUCLG2Q96I99 432 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
PALB2-202ENST00000561514 FAM84BQ96KN1 310 aaPredicted RBP10.63□□□□□ -0.71
PALB2-202ENST00000561514 TEPSINQ96N21 525 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 FZD1Q9UP38 647 aa10.63□□□□□ -0.71
PALB2-202ENST00000561514 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 CLRN2A0PK11 232 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
PALB2-202ENST00000561514 HDLBPQ00341 1268 aaKnown RBP10.62□□□□□ -0.71
PALB2-202ENST00000561514 TNFAIP1Q13829 316 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 PRKG1Q13976 671 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 MFSD14BQ5SR56 506 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 ANKRD44Q8N8A2 993 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 CNNM1Q9NRU3 951 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
PALB2-202ENST00000561514 MROH5Q6ZUA9 1318 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms