RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 PRKG1Q13976 671 aa15.06■□□□□ 0
CARMIL3-204ENST00000561354 WDR63Q8IWG1 891 aa15.06■□□□□ 0
CARMIL3-204ENST00000561354 UNCXA6NJT0 531 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 SNAP23O00161 211 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 FKTNO75072 461 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 BEND3Q5T5X7 828 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ -0
CARMIL3-204ENST00000561354 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
CARMIL3-204ENST00000561354 MANSC4A6NHS7 340 aaPredicted RBP15.04■□□□□ -0
CARMIL3-204ENST00000561354 MYO1BO43795 1136 aa15.04■□□□□ -0
CARMIL3-204ENST00000561354 PPP1R12BO60237 982 aaPredicted RBP15.04■□□□□ -0
CARMIL3-204ENST00000561354 ZBTB48P10074 688 aaPredicted RBP15.04■□□□□ -0
CARMIL3-204ENST00000561354 HELBQ8NG08 1087 aaPredicted RBP15.04■□□□□ -0
CARMIL3-204ENST00000561354 SLC10A4Q96EP9 437 aa15.04■□□□□ -0
CARMIL3-204ENST00000561354 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 SPDYE6P0CI01 402 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 EXOSC9Q06265 439 aaKnown RBP15.03■□□□□ -0
CARMIL3-204ENST00000561354 SUPT20HL1Q3ZLR7 823 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 CFAP100Q494V2 611 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 PRMT6Q96LA8 375 aaPredicted RBP15.03■□□□□ -0
CARMIL3-204ENST00000561354 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
CARMIL3-204ENST00000561354 ECM29Q5VYK3 1845 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 F6X3S4 739 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 CCDC57Q2TAC2 916 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 LMBR1LQ6UX01 489 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 IFNL1Q8IU54 200 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 PCDH10Q9P2E7 1040 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 FZD1Q9UP38 647 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 PCDHAC2Q9Y5I4 1007 aa15.02■□□□□ -0
CARMIL3-204ENST00000561354 A0A1B0GUL6 1792 aa15.02□□□□□ -0.01
CARMIL3-204ENST00000561354 SSC5DA1L4H1 1573 aa15.02□□□□□ -0.01
CARMIL3-204ENST00000561354 F8W031 263 aaPredicted RBP15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 GRM8O00222 908 aa15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 PRPF38BQ5VTL8 546 aaKnown RBP15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 LDHAL6AQ6ZMR3 332 aa15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 WNK4Q96J92 1243 aa15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 MRS2Q9HD23 443 aa15.01□□□□□ -0.01
CARMIL3-204ENST00000561354 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 CLRN2A0PK11 232 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
CARMIL3-204ENST00000561354 ZNF594Q96JF6 807 aaPredicted RBP15□□□□□ -0.01
CARMIL3-204ENST00000561354 CLMNQ96JQ2 1002 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 CNNM1Q9NRU3 951 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 LAMB1P07942 1786 aa15□□□□□ -0.01
CARMIL3-204ENST00000561354 TNRC18O15417 2968 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 USP2O75604 605 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 IREB2P48200 963 aaKnown RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 RASA3Q14644 834 aa14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 NBPF12Q5TAG4 269 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 VEZTQ9HBM0 779 aa14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-204ENST00000561354 AOX1Q06278 1338 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 IGF2BP3O00425 579 aaKnown RBP eCLIP14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 PLIN1O60240 522 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 RBM5P52756 815 aaKnown RBP eCLIP14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 TNFAIP1Q13829 316 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 OTUD7BQ6GQQ9 843 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 ANKRD13AQ8IZ07 590 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 JAG2Q9Y219 1238 aa14.98□□□□□ -0.01
CARMIL3-204ENST00000561354 TESPA1A2RU30 521 aaPredicted RBP14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 HIBADHP31937 336 aaKnown RBP14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 TRIM17Q9Y577 477 aa14.97□□□□□ -0.01
CARMIL3-204ENST00000561354 GJA5P36382 358 aa14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 INTS3Q68E01 1043 aaKnown RBP14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 OTOP1Q7RTM1 612 aa14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 ERO1AQ96HE7 468 aa14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 FAM84BQ96KN1 310 aaPredicted RBP14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.01
CARMIL3-204ENST00000561354 GYG1P46976 350 aa14.95□□□□□ -0.02
CARMIL3-204ENST00000561354 CRHR2Q13324 411 aa14.95□□□□□ -0.02
CARMIL3-204ENST00000561354 KAZALD1Q96I82 304 aa14.95□□□□□ -0.02
CARMIL3-204ENST00000561354 TDRD3Q9H7E2 651 aaKnown RBP14.95□□□□□ -0.02
CARMIL3-204ENST00000561354 RIPOR2Q9Y4F9 1068 aa14.95□□□□□ -0.02
CARMIL3-204ENST00000561354 UTYO14607 1347 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 MROH5Q6ZUA9 1318 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 ANP32CO43423 234 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 SLC4A10Q6U841 1118 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 DZIP1LQ8IYY4 767 aaKnown RBP14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 SUCLG2Q96I99 432 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 TEPSINQ96N21 525 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 PTPN18Q99952 460 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 PUS3Q9BZE2 481 aaKnown RBP14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 PTPN22Q9Y2R2 807 aa14.94□□□□□ -0.02
CARMIL3-204ENST00000561354 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 CRKP46108 304 aa14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 TNNI2P48788 182 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms