RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
ZEB1-223ENST00000561304 USP50Q70EL3 339 aaPredicted RBP9.46□□□□□ -0.9
ZEB1-223ENST00000561304 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
ZEB1-223ENST00000561304 ADARB2Q9NS39 739 aaKnown RBP9.46□□□□□ -0.9
ZEB1-223ENST00000561304 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 HSPA1AP0DMV8 641 aaKnown RBP9.45□□□□□ -0.9
ZEB1-223ENST00000561304 HSPA1BP0DMV9 641 aaKnown RBP9.45□□□□□ -0.9
ZEB1-223ENST00000561304 TNIP1Q15025 636 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 E2F4Q16254 413 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 LINS1Q8NG48 757 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 BCL2L13Q9BXK5 485 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 MYH16Q9H6N6 1097 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 ANKIB1Q9P2G1 1089 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
ZEB1-223ENST00000561304 ZNF609O15014 1411 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 XDHP47989 1333 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
ZEB1-223ENST00000561304 VEGFBP49765 207 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 CST9Q5W186 159 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
ZEB1-223ENST00000561304 EYA3Q99504 573 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 GLIS2Q9BZE0 524 aaPredicted RBP9.44□□□□□ -0.9
ZEB1-223ENST00000561304 CNOT7Q9UIV1 285 aaKnown RBP9.44□□□□□ -0.9
ZEB1-223ENST00000561304 MINPP1Q9UNW1 487 aa9.44□□□□□ -0.9
ZEB1-223ENST00000561304 MED23Q9ULK4 1368 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 RASSF10A6NK89 507 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 EVI5O60447 810 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 CSF1RP07333 972 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 ITGA6P23229 1130 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 KLRK1P26718 216 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 FOXO4P98177 505 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 EPHA10Q5JZY3 1008 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
ZEB1-223ENST00000561304 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
ZEB1-223ENST00000561304 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
ZEB1-223ENST00000561304 ASTN2O75129 1339 aaPredicted RBP9.42□□□□□ -0.9
ZEB1-223ENST00000561304 SNAP23O00161 211 aa9.42□□□□□ -0.9
ZEB1-223ENST00000561304 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
ZEB1-223ENST00000561304 CCT4P50991 539 aaKnown RBP9.42□□□□□ -0.9
ZEB1-223ENST00000561304 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
ZEB1-223ENST00000561304 TXNRD3Q86VQ6 643 aa9.42□□□□□ -0.9
ZEB1-223ENST00000561304 DPF2Q92785 391 aa9.42□□□□□ -0.9
ZEB1-223ENST00000561304 CDCA7LQ96GN5 454 aa9.42□□□□□ -0.9
ZEB1-223ENST00000561304 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
ZEB1-223ENST00000561304 IRS2Q9Y4H2 1338 aa9.41□□□□□ -0.9
ZEB1-223ENST00000561304 VIL1P09327 827 aaKnown RBP9.41□□□□□ -0.9
ZEB1-223ENST00000561304 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
ZEB1-223ENST00000561304 MRPL50Q8N5N7 158 aaKnown RBP9.41□□□□□ -0.9
ZEB1-223ENST00000561304 MXD3Q9BW11 206 aa9.41□□□□□ -0.9
ZEB1-223ENST00000561304 ABT1Q9ULW3 272 aaKnown RBP9.41□□□□□ -0.9
ZEB1-223ENST00000561304 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
ZEB1-223ENST00000561304 AKAP11Q9UKA4 1901 aa9.41□□□□□ -0.9
ZEB1-223ENST00000561304 ADM5C9JUS6 153 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 H7C1D1 291 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 GRM8O00222 908 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 RPS12P25398 132 aaKnown RBP9.4□□□□□ -0.9
ZEB1-223ENST00000561304 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.9
ZEB1-223ENST00000561304 PBX2P40425 430 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 CHRNDQ07001 517 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 SLFN5Q08AF3 891 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
ZEB1-223ENST00000561304 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
ZEB1-223ENST00000561304 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 SSH1Q8WYL5 1049 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 KAZALD1Q96I82 304 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
ZEB1-223ENST00000561304 GMLQ99445 158 aa9.4□□□□□ -0.9
ZEB1-223ENST00000561304 WDR33Q9C0J8 1336 aaKnown RBP9.4□□□□□ -0.91
ZEB1-223ENST00000561304 E9PSI1 815 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 FOXN1O15353 648 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
ZEB1-223ENST00000561304 NBPF7P0C2Y1 421 aaPredicted RBP9.39□□□□□ -0.91
ZEB1-223ENST00000561304 KIF4BQ2VIQ3 1234 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 PPP4R3BQ5MIZ7 849 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 CYP4F22Q6NT55 531 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 LMBR1LQ6UX01 489 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
ZEB1-223ENST00000561304 SUCLG2Q96I99 432 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 ZNF804BA4D1E1 1349 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 OTOFQ9HC10 1997 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 CASP8AP2Q9UKL3 1982 aa9.39□□□□□ -0.91
ZEB1-223ENST00000561304 LAMB1P07942 1786 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 DPYSL4O14531 572 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 TAF5LO75529 589 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
ZEB1-223ENST00000561304 ZNF280AP59817 542 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms