RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 UBE4AQ14139 1066 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 C2orf69Q8N8R5 385 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 TSKSQ9UJT2 592 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 MYH13Q9UKX3 1938 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 AOX1Q06278 1338 aa20.07■□□□□ 0.8
LMX1B-204ENST00000561065 RFX5P48382 616 aaPredicted RBP20.06■□□□□ 0.8
LMX1B-204ENST00000561065 RARSP54136 660 aaKnown RBP20.06■□□□□ 0.8
LMX1B-204ENST00000561065 RGMBQ6NW40 437 aa20.06■□□□□ 0.8
LMX1B-204ENST00000561065 MROH5Q6ZUA9 1318 aa20.06■□□□□ 0.8
LMX1B-204ENST00000561065 MOB2Q70IA6 237 aa20.05■□□□□ 0.8
LMX1B-204ENST00000561065 TDRD7Q8NHU6 1098 aaKnown RBP20.05■□□□□ 0.8
LMX1B-204ENST00000561065 FAM84BQ96KN1 310 aaPredicted RBP20.05■□□□□ 0.8
LMX1B-204ENST00000561065 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
LMX1B-204ENST00000561065 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
LMX1B-204ENST00000561065 F8W031 263 aaPredicted RBP20.04■□□□□ 0.8
LMX1B-204ENST00000561065 NOGQ13253 232 aa20.04■□□□□ 0.8
LMX1B-204ENST00000561065 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
LMX1B-204ENST00000561065 SLC10A3P09131 477 aa20.03■□□□□ 0.8
LMX1B-204ENST00000561065 MMP14P50281 582 aa20.03■□□□□ 0.8
LMX1B-204ENST00000561065 FKBP1AP62942 108 aaKnown RBP20.03■□□□□ 0.8
LMX1B-204ENST00000561065 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
LMX1B-204ENST00000561065 COL1A1P02452 1464 aaPredicted RBP20.03■□□□□ 0.8
LMX1B-204ENST00000561065 CASP8AP2Q9UKL3 1982 aa20.03■□□□□ 0.8
LMX1B-204ENST00000561065 AKAP11Q9UKA4 1901 aa20.03■□□□□ 0.8
LMX1B-204ENST00000561065 CAPN15O75808 1086 aa20.02■□□□□ 0.8
LMX1B-204ENST00000561065 HIBADHP31937 336 aaKnown RBP20.02■□□□□ 0.8
LMX1B-204ENST00000561065 RASAL3Q86YV0 1011 aa20.02■□□□□ 0.8
LMX1B-204ENST00000561065 MTMR14Q8NCE2 650 aa20.02■□□□□ 0.8
LMX1B-204ENST00000561065 PDE8BO95263 885 aa20.02■□□□□ 0.79
LMX1B-204ENST00000561065 ZNF157P51786 506 aaPredicted RBP20.02■□□□□ 0.79
LMX1B-204ENST00000561065 PTPN12Q05209 780 aaKnown RBP20.02■□□□□ 0.79
LMX1B-204ENST00000561065 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.79
LMX1B-204ENST00000561065 TNNQ9UQP3 1299 aa20.02■□□□□ 0.79
LMX1B-204ENST00000561065 KIF16BQ96L93 1317 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 SPDYE2BA6NHP3 402 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 UBTFL1P0CB47 393 aaPredicted RBP20.01■□□□□ 0.79
LMX1B-204ENST00000561065 SPDYE6P0CI01 402 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 FKBP1BP68106 108 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 DLGAP5Q15398 846 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 GRIK5Q16478 980 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 FBXO33Q7Z6M2 555 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 APOBEC3FQ8IUX4 373 aaKnown RBP20.01■□□□□ 0.79
LMX1B-204ENST00000561065 MEIS3Q99687 375 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
LMX1B-204ENST00000561065 IQSEC3Q9UPP2 1182 aaPredicted RBP20.01■□□□□ 0.79
LMX1B-204ENST00000561065 FGFR2P21802 821 aa20■□□□□ 0.79
LMX1B-204ENST00000561065 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
LMX1B-204ENST00000561065 MFSD14BQ5SR56 506 aa20■□□□□ 0.79
LMX1B-204ENST00000561065 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
LMX1B-204ENST00000561065 PRMT6Q96LA8 375 aaPredicted RBP20■□□□□ 0.79
LMX1B-204ENST00000561065 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
LMX1B-204ENST00000561065 LAMB1P07942 1786 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 CLRN2A0PK11 232 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 UBE2Q2LH0YL09 131 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 EYA2O00167 538 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 HNRNPUQ00839 825 aaKnown RBP eCLIP19.99■□□□□ 0.79
LMX1B-204ENST00000561065 CCDC102AQ96A19 550 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 FZD1Q9UP38 647 aa19.99■□□□□ 0.79
LMX1B-204ENST00000561065 CA12O43570 354 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 BCAR3O75815 825 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 TRIM27P14373 513 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 BCAMP50895 628 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 PUM3Q15397 648 aaKnown RBP19.97■□□□□ 0.79
LMX1B-204ENST00000561065 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 TTF2Q9UNY4 1162 aaKnown RBP19.97■□□□□ 0.79
LMX1B-204ENST00000561065 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
LMX1B-204ENST00000561065 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
LMX1B-204ENST00000561065 INTS3Q68E01 1043 aaKnown RBP19.96■□□□□ 0.79
LMX1B-204ENST00000561065 ARHGAP45Q92619 1136 aa19.96■□□□□ 0.79
LMX1B-204ENST00000561065 SIL1Q9H173 461 aa19.96■□□□□ 0.79
LMX1B-204ENST00000561065 PA2G4Q9UQ80 394 aaKnown RBP19.96■□□□□ 0.79
LMX1B-204ENST00000561065 PRKG1Q13976 671 aa19.95■□□□□ 0.78
LMX1B-204ENST00000561065 CSRNP1Q96S65 589 aa19.95■□□□□ 0.78
LMX1B-204ENST00000561065 IPO8O15397 1037 aaKnown RBP19.94■□□□□ 0.78
LMX1B-204ENST00000561065 NF2P35240 595 aa19.94■□□□□ 0.78
LMX1B-204ENST00000561065 TTLL12Q14166 644 aaPredicted RBP19.94■□□□□ 0.78
LMX1B-204ENST00000561065 VPS37DQ86XT2 251 aa19.94■□□□□ 0.78
LMX1B-204ENST00000561065 VEZTQ9HBM0 779 aa19.94■□□□□ 0.78
LMX1B-204ENST00000561065 SERPINA10Q9UK55 444 aa19.94■□□□□ 0.78
LMX1B-204ENST00000561065 CIAO1O76071 339 aa19.93■□□□□ 0.78
LMX1B-204ENST00000561065 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
LMX1B-204ENST00000561065 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
LMX1B-204ENST00000561065 CAVIN4Q5BKX8 364 aa19.93■□□□□ 0.78
LMX1B-204ENST00000561065 IFIT1P09914 478 aaKnown RBP19.92■□□□□ 0.78
LMX1B-204ENST00000561065 CRKP46108 304 aa19.92■□□□□ 0.78
LMX1B-204ENST00000561065 CDAN1Q8IWY9 1227 aa19.92■□□□□ 0.78
LMX1B-204ENST00000561065 TDRD3Q9H7E2 651 aaKnown RBP19.92■□□□□ 0.78
LMX1B-204ENST00000561065 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
LMX1B-204ENST00000561065 SAGE1Q9NXZ1 904 aa19.92■□□□□ 0.78
LMX1B-204ENST00000561065 PPP2R3BQ9Y5P8 575 aa19.92■□□□□ 0.78
LMX1B-204ENST00000561065 MYO1BO43795 1136 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 SLC5A1P13866 664 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 LDLRAD1Q5T700 205 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
LMX1B-204ENST00000561065 ATF7IPQ6VMQ6 1270 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 DZIP1LQ8IYY4 767 aaKnown RBP19.91■□□□□ 0.78
LMX1B-204ENST00000561065 LPIN2Q92539 896 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms