RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 PLBD2Q8NHP8 589 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 ARHGAP39Q9C0H5 1083 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 VEZTQ9HBM0 779 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
HERC1-210ENST00000560897 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
HERC1-210ENST00000560897 CCL5P13501 91 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 GRK4P32298 578 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 UBE2Q1Q7Z7E8 422 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
HERC1-210ENST00000560897 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.42
HERC1-210ENST00000560897 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
HERC1-210ENST00000560897 TLR2O60603 784 aa12.45□□□□□ -0.42
HERC1-210ENST00000560897 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
HERC1-210ENST00000560897 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
HERC1-210ENST00000560897 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
HERC1-210ENST00000560897 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
HERC1-210ENST00000560897 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
HERC1-210ENST00000560897 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
HERC1-210ENST00000560897 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
HERC1-210ENST00000560897 BMP8BP34820 402 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
HERC1-210ENST00000560897 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
HERC1-210ENST00000560897 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
HERC1-210ENST00000560897 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
HERC1-210ENST00000560897 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 CSADQ9Y600 493 aa12.44□□□□□ -0.42
HERC1-210ENST00000560897 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
HERC1-210ENST00000560897 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
HERC1-210ENST00000560897 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
HERC1-210ENST00000560897 TNFAIP1Q13829 316 aa12.43□□□□□ -0.42
HERC1-210ENST00000560897 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
HERC1-210ENST00000560897 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
HERC1-210ENST00000560897 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 PDE8AO60658 829 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 CETPP11597 493 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 CAPN2P17655 700 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 PSMC4P43686 418 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
HERC1-210ENST00000560897 GTF2IP78347 998 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 LRIT3Q3SXY7 679 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
HERC1-210ENST00000560897 SGPL1O95470 568 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 TFRCP02786 760 aaKnown RBP12.41□□□□□ -0.42
HERC1-210ENST00000560897 RBM5P52756 815 aaKnown RBP eCLIP12.41□□□□□ -0.42
HERC1-210ENST00000560897 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
HERC1-210ENST00000560897 RASA3Q14644 834 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 TDHQ8IZJ6 230 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 GDF15Q99988 308 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
HERC1-210ENST00000560897 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
HERC1-210ENST00000560897 SPEF2Q9C093 1822 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
HERC1-210ENST00000560897 COL9A1P20849 921 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 OSBPP22059 807 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 KCNJ4P48050 445 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 BCAMP50895 628 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
HERC1-210ENST00000560897 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 VCANP13611 3396 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 SNAPC2Q13487 334 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 VGLL4Q14135 290 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 UNC93B1Q9H1C4 597 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
HERC1-210ENST00000560897 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
HERC1-210ENST00000560897 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
HERC1-210ENST00000560897 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
HERC1-210ENST00000560897 BTBD19C9JJ37 291 aa12.38□□□□□ -0.43
HERC1-210ENST00000560897 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
HERC1-210ENST00000560897 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
HERC1-210ENST00000560897 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
HERC1-210ENST00000560897 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
HERC1-210ENST00000560897 CPA4Q9UI42 421 aa12.38□□□□□ -0.43
HERC1-210ENST00000560897 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 PCCAP05165 728 aaPredicted RBP12.37□□□□□ -0.43
HERC1-210ENST00000560897 PPP2R1AP30153 589 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
HERC1-210ENST00000560897 FCGRTP55899 365 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 PRKCZQ05513 592 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
HERC1-210ENST00000560897 C17orf99Q6UX52 265 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms