RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PLCG2P16885 1265 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 KLRK1P26718 216 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 RASSF7Q02833 373 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 TFCP2Q12800 502 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 G3BP1Q13283 466 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 OS9Q13438 667 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 SOGA3Q5TF21 947 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 ERC1Q8IUD2 1116 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 HELBQ8NG08 1087 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 RHPN1Q8TCX5 695 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 GCC1Q96CN9 775 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 KIF1BPQ96EK5 621 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 GPR101Q96P66 508 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 RTFDC1Q9BY42 306 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 POLLQ9UGP5 575 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 COL1A1P02452 1464 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 CHD4Q14839 1912 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 AKAP11Q9UKA4 1901 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 APBB1O00213 710 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 PPP1R37O75864 691 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 UFL1O94874 794 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 ATP2B4P23634 1241 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 PRELPP51888 382 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 PUM3Q15397 648 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 ATP2B3Q16720 1220 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 TNNI3KQ59H18 835 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 MPNDQ8N594 471 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 PSMD1Q99460 953 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 NSFL1CQ9UNZ2 370 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 FPGT-TNNI3KV9GXZ4 949 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 ZNF804BA4D1E1 1349 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 SALL3Q9BXA9 1300 aa8.68□□□□□ -1.02
CTDSPL2-210ENST00000560834 A0A1B0GUL7 405 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 ADORA1P30542 326 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 CENPQQ7L2Z9 268 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 RTKN2Q8IZC4 609 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 EAF2Q96CJ1 260 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 TAOK3Q9H2K8 898 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 GPR108Q9NPR9 543 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 ANKIB1Q9P2G1 1089 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 CEP126Q9P2H0 1117 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 LEMD3Q9Y2U8 911 aa8.67□□□□□ -1.02
CTDSPL2-210ENST00000560834 NUCB1Q02818 461 aa8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 C15orf52Q6ZUT6 534 aaKnown RBP8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 LPIN2Q92539 896 aa8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 DBNLQ9UJU6 430 aaKnown RBP8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 ADAMTSL1Q8N6G6 1762 aa8.66□□□□□ -1.02
CTDSPL2-210ENST00000560834 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 SLC5A1P13866 664 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 PDE4AP27815 886 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 KCNJ4P48050 445 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 TIMM10P62072 90 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 AOC3Q16853 763 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 AACSQ86V21 672 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 CLASRPQ8N2M8 674 aaKnown RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 OTUD7AQ8TE49 926 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 TMX4Q9H1E5 349 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 AKAP2Q9Y2D5 859 aa8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 MYO5AQ9Y4I1 1855 aaKnown RBP8.65□□□□□ -1.02
CTDSPL2-210ENST00000560834 MYH7P12883 1935 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 PPIP5K2O43314 1243 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 IFIT1P09914 478 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 PHKA1P46020 1223 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 GYG1P46976 350 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 GPR162Q16538 588 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 ANKRD45Q5TZF3 282 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 XAGE2Q96GT9 111 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 EYA3Q99504 573 aa8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 CCDC8Q9H0W5 538 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-210ENST00000560834 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms