RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 HDAC5Q9UQL6 1122 aa19.02■□□□□ 0.64
SNRPA1-210ENST00000560383 ECM29Q5VYK3 1845 aa19.02■□□□□ 0.63
SNRPA1-210ENST00000560383 RFX5P48382 616 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-210ENST00000560383 TTLL5Q6EMB2 1281 aa19.01■□□□□ 0.63
SNRPA1-210ENST00000560383 MROH5Q6ZUA9 1318 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 WNT10BO00744 389 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 UBE4AQ14139 1066 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 FBXW7Q969H0 707 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 MEIS3Q99687 375 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 CD209Q9NNX6 404 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 AKAP11Q9UKA4 1901 aa19■□□□□ 0.63
SNRPA1-210ENST00000560383 COL1A1P02452 1464 aaPredicted RBP18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 SLC10A3P09131 477 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 ZNF157P51786 506 aaPredicted RBP18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 NBPF9Q3BBW0 867 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 ZKSCAN2Q63HK3 967 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 MXD3Q9BW11 206 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 SAGE1Q9NXZ1 904 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 HDAC9Q9UKV0 1011 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
SNRPA1-210ENST00000560383 ARAP2Q8WZ64 1704 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 GNAI3P08754 354 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 IL1R1P14778 569 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 GTF2IP78347 998 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 PTPN12Q05209 780 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 LRRC24Q50LG9 513 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 VGLL2Q8N8G2 317 aa18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-210ENST00000560383 FKBP1AP62942 108 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 REM2Q8IYK8 340 aaPredicted RBP18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 KLHDC4Q8TBB5 520 aa18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 ZIC5Q96T25 663 aa18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 TSKSQ9UJT2 592 aa18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 FBXO3Q9UK99 471 aa18.97■□□□□ 0.63
SNRPA1-210ENST00000560383 EYA2O00167 538 aa18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 PLIN1O60240 522 aa18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 APOBEC3FQ8IUX4 373 aaKnown RBP18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 KIAA0825Q8IV33 1275 aa18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 ABHD8Q96I13 439 aa18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 ZBED3Q96IU2 234 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-210ENST00000560383 CASP8AP2Q9UKL3 1982 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 PDE8BO95263 885 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 MTX1Q13505 466 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 RASAL3Q86YV0 1011 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 MTMR14Q8NCE2 650 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 CLUAP1Q96AJ1 413 aa18.95■□□□□ 0.62
SNRPA1-210ENST00000560383 SASH1O94885 1247 aa18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 NF2P35240 595 aa18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 METTL24Q5JXM2 366 aa18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 ATG9AQ7Z3C6 839 aa18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 TMEM57Q8N5G2 664 aa18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 FAM84BQ96KN1 310 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-210ENST00000560383 CIAO1O76071 339 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 FGFR2P21802 821 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 FBXO33Q7Z6M2 555 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 CERS5Q8N5B7 392 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 TDRD7Q8NHU6 1098 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 COPRSQ9NQ92 184 aa18.93■□□□□ 0.62
SNRPA1-210ENST00000560383 HIBADHP31937 336 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-210ENST00000560383 FAM205AQ6ZU69 1335 aa18.92■□□□□ 0.62
SNRPA1-210ENST00000560383 LAMB1P07942 1786 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 GNAI2P04899 355 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 GYG1P46976 350 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 DLGAP5Q15398 846 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 SCAF8Q9UPN6 1271 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 PPP2R3BQ9Y5P8 575 aa18.91■□□□□ 0.62
SNRPA1-210ENST00000560383 RLBP1P12271 317 aa18.9■□□□□ 0.62
SNRPA1-210ENST00000560383 IL15P40933 162 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-210ENST00000560383 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
SNRPA1-210ENST00000560383 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-210ENST00000560383 RNF186Q9NXI6 227 aa18.89■□□□□ 0.61
SNRPA1-210ENST00000560383 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 UBE2Q2LH0YL09 131 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 SRGAP3O43295 1099 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 MYO1BO43795 1136 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 IFIT1P09914 478 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 CAVIN4Q5BKX8 364 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 MOB2Q70IA6 237 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 ARMC9Q7Z3E5 817 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 LPIN2Q92539 896 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 SIL1Q9H173 461 aa18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 PA2G4Q9UQ80 394 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-210ENST00000560383 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 TTLL12Q14166 644 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 CFAP100Q494V2 611 aa18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 MCOLN1Q9GZU1 580 aa18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 DEFB129Q9H1M3 183 aa18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 CEP126Q9P2H0 1117 aa18.87■□□□□ 0.61
SNRPA1-210ENST00000560383 SSC5DA1L4H1 1573 aa18.86■□□□□ 0.61
SNRPA1-210ENST00000560383 TRPA1O75762 1119 aa18.86■□□□□ 0.61
SNRPA1-210ENST00000560383 BCAMP50895 628 aa18.86■□□□□ 0.61
SNRPA1-210ENST00000560383 F8W031 263 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms