RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-212ENST00000560179 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
ETFA-212ENST00000560179 DTHD1Q6ZMT9 781 aa12.26□□□□□ -0.45
ETFA-212ENST00000560179 SORBS3O60504 671 aa12.25□□□□□ -0.45
ETFA-212ENST00000560179 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
ETFA-212ENST00000560179 H3BRJ5 948 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 GSTT1P30711 240 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 TXNDC11Q6PKC3 985 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 C3orf58Q8NDZ4 430 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 ZNF576Q9H609 170 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
ETFA-212ENST00000560179 A0A0A0MRY4 1105 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 SPDYE3A6NKU9 549 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 USP17L7P0C7H9 530 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 DTWD1Q8N5C7 304 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
ETFA-212ENST00000560179 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
ETFA-212ENST00000560179 NOP53Q9NZM5 478 aaKnown RBP12.23□□□□□ -0.45
ETFA-212ENST00000560179 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
ETFA-212ENST00000560179 FAM117BQ6P1L5 589 aa12.22□□□□□ -0.45
ETFA-212ENST00000560179 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
ETFA-212ENST00000560179 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 DEAF1O75398 565 aaPredicted RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 ESRRAP11474 423 aaPredicted RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 ITGAEP38570 1179 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 PCDH1Q08174 1060 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 IKBKEQ14164 716 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 MRPL58Q14197 206 aaKnown RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 ZNF423Q2M1K9 1284 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 RPS26P11Q5JNZ5 115 aaPredicted RBP12.21□□□□□ -0.45
ETFA-212ENST00000560179 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 VTI1BQ9UEU0 232 aa12.21□□□□□ -0.45
ETFA-212ENST00000560179 UNCXA6NJT0 531 aa12.2□□□□□ -0.46
ETFA-212ENST00000560179 FSCN2O14926 492 aa12.2□□□□□ -0.46
ETFA-212ENST00000560179 RAC1P63000 192 aa12.2□□□□□ -0.46
ETFA-212ENST00000560179 SRA1Q9HD15 236 aaKnown RBP12.2□□□□□ -0.46
ETFA-212ENST00000560179 FAM229AH3BQW9 127 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 CTSHP09668 335 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 HGSNATQ68CP4 663 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 MAP4K3Q8IVH8 894 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
ETFA-212ENST00000560179 WNT8BQ93098 351 aa12.19□□□□□ -0.46
ETFA-212ENST00000560179 COL8A1P27658 744 aa12.18□□□□□ -0.46
ETFA-212ENST00000560179 FAAP100Q0VG06 881 aa12.18□□□□□ -0.46
ETFA-212ENST00000560179 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
ETFA-212ENST00000560179 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
ETFA-212ENST00000560179 OSGEPQ9NPF4 335 aa12.18□□□□□ -0.46
ETFA-212ENST00000560179 TM4SF5O14894 197 aa12.17□□□□□ -0.46
ETFA-212ENST00000560179 PRRT3Q5FWE3 981 aa12.17□□□□□ -0.46
ETFA-212ENST00000560179 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
ETFA-212ENST00000560179 MRRFQ96E11 262 aaKnown RBP12.17□□□□□ -0.46
ETFA-212ENST00000560179 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
ETFA-212ENST00000560179 PPM1HQ9ULR3 514 aa12.17□□□□□ -0.46
ETFA-212ENST00000560179 B3GALT4O96024 378 aa12.16□□□□□ -0.46
ETFA-212ENST00000560179 ARL4DP49703 201 aa12.16□□□□□ -0.46
ETFA-212ENST00000560179 C19orf57Q0VDD7 668 aa12.16□□□□□ -0.46
ETFA-212ENST00000560179 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
ETFA-212ENST00000560179 KLHDC7BQ96G42 594 aa12.16□□□□□ -0.46
ETFA-212ENST00000560179 SOX17Q9H6I2 414 aaPredicted RBP12.16□□□□□ -0.46
ETFA-212ENST00000560179 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
ETFA-212ENST00000560179 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
ETFA-212ENST00000560179 CRELD1Q96HD1 420 aa12.15□□□□□ -0.46
ETFA-212ENST00000560179 RNF225M0QZC1 329 aaPredicted RBP12.14□□□□□ -0.47
ETFA-212ENST00000560179 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
ETFA-212ENST00000560179 KIAA1522Q9P206 1035 aaPredicted RBP12.14□□□□□ -0.47
ETFA-212ENST00000560179 DLL1O00548 723 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 ELNP15502 786 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 VAMP1P23763 118 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 SUZ12Q15022 739 aaKnown RBP12.13□□□□□ -0.47
ETFA-212ENST00000560179 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
ETFA-212ENST00000560179 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
ETFA-212ENST00000560179 CD68P34810 354 aaPredicted RBP12.12□□□□□ -0.47
ETFA-212ENST00000560179 GSTM4Q03013 218 aa12.12□□□□□ -0.47
ETFA-212ENST00000560179 TAF1CQ15572 869 aaPredicted RBP12.12□□□□□ -0.47
ETFA-212ENST00000560179 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
ETFA-212ENST00000560179 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
ETFA-212ENST00000560179 GPN3Q9UHW5 284 aaPredicted RBP12.12□□□□□ -0.47
ETFA-212ENST00000560179 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
ETFA-212ENST00000560179 FBXO24O75426 580 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 GRIK4Q16099 956 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 ALYREFQ86V81 257 aaKnown RBP12.11□□□□□ -0.47
ETFA-212ENST00000560179 NECAB3Q96P71 396 aaPredicted RBP12.11□□□□□ -0.47
ETFA-212ENST00000560179 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 CEP44Q9C0F1 390 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
ETFA-212ENST00000560179 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
ETFA-212ENST00000560179 PPP2R3AQ06190 1150 aa12.1□□□□□ -0.47
ETFA-212ENST00000560179 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
ETFA-212ENST00000560179 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
ETFA-212ENST00000560179 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
ETFA-212ENST00000560179 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
ETFA-212ENST00000560179 ST13P50502 369 aaKnown RBP12.09□□□□□ -0.47
ETFA-212ENST00000560179 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
ETFA-212ENST00000560179 ENC1O14682 589 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms