RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
SMAD3-213ENST00000560175 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
SMAD3-213ENST00000560175 ARAP2Q8WZ64 1704 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 NBPF9Q3BBW0 867 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 GGA3Q9NZ52 723 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 CEP126Q9P2H0 1117 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
SMAD3-213ENST00000560175 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
SMAD3-213ENST00000560175 CELF2O95319 508 aaKnown RBP16.45■□□□□ 0.22
SMAD3-213ENST00000560175 IFIT1P09914 478 aaKnown RBP16.45■□□□□ 0.22
SMAD3-213ENST00000560175 BCAMP50895 628 aa16.45■□□□□ 0.22
SMAD3-213ENST00000560175 CAVIN4Q5BKX8 364 aa16.45■□□□□ 0.22
SMAD3-213ENST00000560175 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
SMAD3-213ENST00000560175 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
SMAD3-213ENST00000560175 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
SMAD3-213ENST00000560175 PNMA6EA0A0J9YXQ4 647 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 VEGFBP49765 207 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 POLA2Q14181 598 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 DLK2Q6UY11 383 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 SIL1Q9H173 461 aa16.44■□□□□ 0.22
SMAD3-213ENST00000560175 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
SMAD3-213ENST00000560175 MS4A1P11836 297 aa16.43■□□□□ 0.22
SMAD3-213ENST00000560175 SLC5A1P13866 664 aa16.43■□□□□ 0.22
SMAD3-213ENST00000560175 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
SMAD3-213ENST00000560175 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
SMAD3-213ENST00000560175 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
SMAD3-213ENST00000560175 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
SMAD3-213ENST00000560175 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
SMAD3-213ENST00000560175 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
SMAD3-213ENST00000560175 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
SMAD3-213ENST00000560175 MYH13Q9UKX3 1938 aa16.42■□□□□ 0.22
SMAD3-213ENST00000560175 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
SMAD3-213ENST00000560175 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
SMAD3-213ENST00000560175 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
SMAD3-213ENST00000560175 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
SMAD3-213ENST00000560175 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
SMAD3-213ENST00000560175 PRMT6Q96LA8 375 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-213ENST00000560175 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
SMAD3-213ENST00000560175 ABT1Q9ULW3 272 aaKnown RBP16.41■□□□□ 0.22
SMAD3-213ENST00000560175 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-213ENST00000560175 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
SMAD3-213ENST00000560175 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 GRIK5Q16478 980 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
SMAD3-213ENST00000560175 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
SMAD3-213ENST00000560175 SEMA3EO15041 775 aa16.39■□□□□ 0.21
SMAD3-213ENST00000560175 FKBP1BP68106 108 aa16.39■□□□□ 0.21
SMAD3-213ENST00000560175 TFCP2Q12800 502 aa16.39■□□□□ 0.21
SMAD3-213ENST00000560175 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
SMAD3-213ENST00000560175 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
SMAD3-213ENST00000560175 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
SMAD3-213ENST00000560175 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
SMAD3-213ENST00000560175 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
SMAD3-213ENST00000560175 ECE1P42892 770 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 TIMM10P62072 90 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
SMAD3-213ENST00000560175 C2orf69Q8N8R5 385 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 CAPNS2Q96L46 248 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
SMAD3-213ENST00000560175 COL1A1P02452 1464 aaPredicted RBP16.37■□□□□ 0.21
SMAD3-213ENST00000560175 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 F8W031 263 aaPredicted RBP16.37■□□□□ 0.21
SMAD3-213ENST00000560175 MAP2K2P36507 400 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 PHKA1P46020 1223 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 PDE3AQ14432 1141 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
SMAD3-213ENST00000560175 CCDC102BQ68D86 513 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 ZNF408Q9H9D4 720 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 WBP1LQ9NX94 342 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 AOX1Q06278 1338 aa16.37■□□□□ 0.21
SMAD3-213ENST00000560175 PDS5AQ29RF7 1337 aaKnown RBP16.37■□□□□ 0.21
SMAD3-213ENST00000560175 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
SMAD3-213ENST00000560175 ADORA1P30542 326 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 CRKP46108 304 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 HUNKP57058 714 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMAD3-213ENST00000560175 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 XAGE2Q96GT9 111 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
SMAD3-213ENST00000560175 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms