RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SSC5DA1L4H1 1573 aa26.02■■□□□ 1.76
PSEN1-225ENST00000560005 IGHMBP2P38935 993 aaKnown RBP26.01■■□□□ 1.75
PSEN1-225ENST00000560005 GNAI1P63096 354 aa26.01■■□□□ 1.75
PSEN1-225ENST00000560005 CD99L2Q8TCZ2 262 aa26.01■■□□□ 1.75
PSEN1-225ENST00000560005 ERO1AQ96HE7 468 aa26.01■■□□□ 1.75
PSEN1-225ENST00000560005 MYH16Q9H6N6 1097 aa26.01■■□□□ 1.75
PSEN1-225ENST00000560005 PTPN22Q9Y2R2 807 aa26.01■■□□□ 1.75
PSEN1-225ENST00000560005 RBBP6Q7Z6E9 1792 aaKnown RBP26■■□□□ 1.75
PSEN1-225ENST00000560005 PI4KAP2A4QPH2 592 aa26■■□□□ 1.75
PSEN1-225ENST00000560005 PPP1R12BO60237 982 aaPredicted RBP26■■□□□ 1.75
PSEN1-225ENST00000560005 DLGAP5Q15398 846 aa26■■□□□ 1.75
PSEN1-225ENST00000560005 CCDC30Q5VVM6 783 aa26■■□□□ 1.75
PSEN1-225ENST00000560005 KSR2Q6VAB6 950 aa26■■□□□ 1.75
PSEN1-225ENST00000560005 PI4KAP1Q8N8J0 262 aa26■■□□□ 1.75
PSEN1-225ENST00000560005 CWF19L2Q2TBE0 894 aaKnown RBP25.99■■□□□ 1.75
PSEN1-225ENST00000560005 ANKRD2Q9GZV1 360 aa25.99■■□□□ 1.75
PSEN1-225ENST00000560005 SUPT16HQ9Y5B9 1047 aaKnown RBP25.99■■□□□ 1.75
PSEN1-225ENST00000560005 LAMB1P07942 1786 aa25.98■■□□□ 1.75
PSEN1-225ENST00000560005 EN2P19622 333 aaPredicted RBP25.98■■□□□ 1.75
PSEN1-225ENST00000560005 NEXNQ0ZGT2 675 aa25.98■■□□□ 1.75
PSEN1-225ENST00000560005 CRHR2Q13324 411 aa25.98■■□□□ 1.75
PSEN1-225ENST00000560005 PCDHAC2Q9Y5I4 1007 aa25.98■■□□□ 1.75
PSEN1-225ENST00000560005 KCNJ4P48050 445 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 UBE3BQ7Z3V4 1068 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 ARMC5Q96C12 935 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 EFCC1Q9HA90 598 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 CD209Q9NNX6 404 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 PPP2R3BQ9Y5P8 575 aa25.97■■□□□ 1.75
PSEN1-225ENST00000560005 ITGA6P23229 1130 aa25.96■■□□□ 1.75
PSEN1-225ENST00000560005 CERS5Q8N5B7 392 aa25.96■■□□□ 1.75
PSEN1-225ENST00000560005 MPHOSPH8Q99549 860 aa25.96■■□□□ 1.75
PSEN1-225ENST00000560005 RCAN3Q9UKA8 241 aa25.96■■□□□ 1.75
PSEN1-225ENST00000560005 CLRN2A0PK11 232 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 NEURL1BA8MQ27 555 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 GJA5P36382 358 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 FXR1P51114 621 aaKnown RBP eCLIP25.95■■□□□ 1.74
PSEN1-225ENST00000560005 SUPT20HL1Q3ZLR7 823 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 OTUD7BQ6GQQ9 843 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 MTMR14Q8NCE2 650 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
PSEN1-225ENST00000560005 UNCXA6NJT0 531 aa25.94■■□□□ 1.74
PSEN1-225ENST00000560005 F8W031 263 aaPredicted RBP25.94■■□□□ 1.74
PSEN1-225ENST00000560005 H7C1W4 665 aa25.94■■□□□ 1.74
PSEN1-225ENST00000560005 CAP1Q01518 475 aa25.94■■□□□ 1.74
PSEN1-225ENST00000560005 NBPF12Q5TAG4 269 aaPredicted RBP25.94■■□□□ 1.74
PSEN1-225ENST00000560005 TSPYL6Q8N831 410 aa25.94■■□□□ 1.74
PSEN1-225ENST00000560005 ECM29Q5VYK3 1845 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 SP3Q02447 781 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 CHRNDQ07001 517 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 CFAP100Q494V2 611 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 PTPN18Q99952 460 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 VEZTQ9HBM0 779 aa25.93■■□□□ 1.74
PSEN1-225ENST00000560005 SNAP23O00161 211 aa25.92■■□□□ 1.74
PSEN1-225ENST00000560005 MYO1BO43795 1136 aa25.92■■□□□ 1.74
PSEN1-225ENST00000560005 IREB2P48200 963 aaKnown RBP25.92■■□□□ 1.74
PSEN1-225ENST00000560005 AOX1Q06278 1338 aa25.91■■□□□ 1.74
PSEN1-225ENST00000560005 SPDYE2BA6NHP3 402 aa25.91■■□□□ 1.74
PSEN1-225ENST00000560005 USP2O75604 605 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-225ENST00000560005 SPDYE6P0CI01 402 aa25.91■■□□□ 1.74
PSEN1-225ENST00000560005 ERICH6BQ5W0A0 696 aa25.91■■□□□ 1.74
PSEN1-225ENST00000560005 PRMT6Q96LA8 375 aaPredicted RBP25.91■■□□□ 1.74
PSEN1-225ENST00000560005 CT47B1P0C2W7 299 aaPredicted RBP25.9■■□□□ 1.74
PSEN1-225ENST00000560005 ANKRD13AQ8IZ07 590 aa25.9■■□□□ 1.74
PSEN1-225ENST00000560005 TMEM106CQ9BVX2 250 aa25.9■■□□□ 1.74
PSEN1-225ENST00000560005 PLA2G12BQ9BX93 195 aa25.9■■□□□ 1.74
PSEN1-225ENST00000560005 IRS2Q9Y4H2 1338 aa25.89■■□□□ 1.74
PSEN1-225ENST00000560005 CEP290O15078 2479 aa25.89■■□□□ 1.74
PSEN1-225ENST00000560005 TESPA1A2RU30 521 aaPredicted RBP25.89■■□□□ 1.74
PSEN1-225ENST00000560005 STK31Q9BXU1 1019 aa25.89■■□□□ 1.74
PSEN1-225ENST00000560005 TAF5LO75529 589 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 CSF1RP07333 972 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 GCKRQ14397 625 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 RASA3Q14644 834 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 G2E3Q7L622 706 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 ZNF333Q96JL9 665 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 ELP3Q9H9T3 547 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 JAG2Q9Y219 1238 aa25.88■■□□□ 1.73
PSEN1-225ENST00000560005 CASP7P55210 303 aa25.87■■□□□ 1.73
PSEN1-225ENST00000560005 HELBQ8NG08 1087 aaPredicted RBP25.87■■□□□ 1.73
PSEN1-225ENST00000560005 OPTNQ96CV9 577 aa25.87■■□□□ 1.73
PSEN1-225ENST00000560005 SPINK5Q9NQ38 1064 aaPredicted RBP25.87■■□□□ 1.73
PSEN1-225ENST00000560005 COLQQ9Y215 455 aaPredicted RBP25.87■■□□□ 1.73
PSEN1-225ENST00000560005 OTOFQ9HC10 1997 aa25.86■■□□□ 1.73
PSEN1-225ENST00000560005 RBM5P52756 815 aaKnown RBP eCLIP25.86■■□□□ 1.73
PSEN1-225ENST00000560005 IL1R1P14778 569 aa25.85■■□□□ 1.73
PSEN1-225ENST00000560005 SLC9C1Q4G0N8 1177 aa25.85■■□□□ 1.73
PSEN1-225ENST00000560005 C15orf52Q6ZUT6 534 aaKnown RBP25.85■■□□□ 1.73
PSEN1-225ENST00000560005 PTCH2Q9Y6C5 1203 aa25.85■■□□□ 1.73
PSEN1-225ENST00000560005 SZT2Q5T011 3432 aa25.85■■□□□ 1.73
PSEN1-225ENST00000560005 TRIOBPQ9H2D6 2365 aa25.84■■□□□ 1.73
PSEN1-225ENST00000560005 ANKRD18BA2A2Z9 1011 aa25.84■■□□□ 1.73
PSEN1-225ENST00000560005 FKBP1AP62942 108 aaKnown RBP25.84■■□□□ 1.73
PSEN1-225ENST00000560005 ZNF804AQ7Z570 1209 aa25.84■■□□□ 1.73
PSEN1-225ENST00000560005 TSR2Q969E8 191 aaKnown RBP25.84■■□□□ 1.73
PSEN1-225ENST00000560005 MS4A4AQ96JQ5 239 aa25.84■■□□□ 1.73
PSEN1-225ENST00000560005 NBPF11Q86T75 865 aa25.83■■□□□ 1.73
PSEN1-225ENST00000560005 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.83■■□□□ 1.73
PSEN1-225ENST00000560005 BRI3BPQ8WY22 251 aa25.83■■□□□ 1.73
PSEN1-225ENST00000560005 A0A1B0GUL6 1792 aa25.82■■□□□ 1.72
PSEN1-225ENST00000560005 MYCP01106 439 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms