RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 HSPA1AP0DMV8 641 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 HSPA1BP0DMV9 641 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 SLC5A1P13866 664 aa10.2□□□□□ -0.78
SNX1-207ENST00000559401 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 PUM3Q15397 648 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 NBPF9Q3BBW0 867 aa10.2□□□□□ -0.78
SNX1-207ENST00000559401 ECM29Q5VYK3 1845 aa10.2□□□□□ -0.78
SNX1-207ENST00000559401 ITPRIPQ8IWB1 547 aa10.2□□□□□ -0.78
SNX1-207ENST00000559401 VGLL2Q8N8G2 317 aa10.2□□□□□ -0.78
SNX1-207ENST00000559401 FAM84BQ96KN1 310 aaPredicted RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 SCAF8Q9UPN6 1271 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
SNX1-207ENST00000559401 WNT10BO00744 389 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 GNAI2P04899 355 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 ECE1P42892 770 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 RBM5P52756 815 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNX1-207ENST00000559401 DLGAP5Q15398 846 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 MFSD14BQ5SR56 506 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 CYP4F22Q6NT55 531 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 DZIP1LQ8IYY4 767 aaKnown RBP10.19□□□□□ -0.78
SNX1-207ENST00000559401 CERS5Q8N5B7 392 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 CDCA5Q96FF9 252 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 CAPNS2Q96L46 248 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
SNX1-207ENST00000559401 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 PITPNM2Q9BZ72 1349 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 WDR33Q9C0J8 1336 aaKnown RBP10.18□□□□□ -0.78
SNX1-207ENST00000559401 CIAO1O76071 339 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
SNX1-207ENST00000559401 BCAMP50895 628 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 HUNKP57058 714 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 ATP2B3Q16720 1220 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 ATG9AQ7Z3C6 839 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 SAPCD2Q86UD0 394 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 C2orf69Q8N8R5 385 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 TDRD7Q8NHU6 1098 aaKnown RBP10.18□□□□□ -0.78
SNX1-207ENST00000559401 AIDAQ96BJ3 306 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 GBA2Q9HCG7 927 aaPredicted RBP10.18□□□□□ -0.78
SNX1-207ENST00000559401 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
SNX1-207ENST00000559401 MYO1BO43795 1136 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 NF2P35240 595 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 MMP14P50281 582 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 FKBP1AP62942 108 aaKnown RBP10.17□□□□□ -0.78
SNX1-207ENST00000559401 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
SNX1-207ENST00000559401 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 APOBEC3FQ8IUX4 373 aaKnown RBP10.17□□□□□ -0.78
SNX1-207ENST00000559401 LPIN2Q92539 896 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 COPRSQ9NQ92 184 aa10.17□□□□□ -0.78
SNX1-207ENST00000559401 TTF2Q9UNY4 1162 aaKnown RBP10.17□□□□□ -0.78
SNX1-207ENST00000559401 PAPPA2Q9BXP8 1791 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 THSD7BQ9C0I4 1608 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 CLRN2A0PK11 232 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 RLBP1P12271 317 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 FGFR2P21802 821 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 PRAMEF18Q5VWM3 479 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 FBXO33Q7Z6M2 555 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 TBC1D22AQ8WUA7 517 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 VEZTQ9HBM0 779 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
SNX1-207ENST00000559401 PNMA6EA0A0J9YXQ4 647 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 AOC2O75106 756 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 TFCP2Q12800 502 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 G3BP1Q13283 466 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNX1-207ENST00000559401 OS9Q13438 667 aaPredicted RBP10.15□□□□□ -0.78
SNX1-207ENST00000559401 MTX1Q13505 466 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 PRKG1Q13976 671 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 PANK1Q8TE04 598 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
SNX1-207ENST00000559401 GNL3LQ9NVN8 582 aaKnown RBP10.15□□□□□ -0.78
SNX1-207ENST00000559401 SPDYE2BA6NHP3 402 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 SPDYE6P0CI01 402 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 MS4A1P11836 297 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
SNX1-207ENST00000559401 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
SNX1-207ENST00000559401 RGMBQ6NW40 437 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 MTMR14Q8NCE2 650 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 HHIPL1Q96JK4 782 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 PRMT6Q96LA8 375 aaPredicted RBP10.14□□□□□ -0.79
SNX1-207ENST00000559401 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
SNX1-207ENST00000559401 RCAN3Q9UKA8 241 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 AKAP2Q9Y2D5 859 aa10.14□□□□□ -0.79
SNX1-207ENST00000559401 COL1A1P02452 1464 aaPredicted RBP10.14□□□□□ -0.79
SNX1-207ENST00000559401 MAST3O60307 1309 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 A0A1B0GUL7 405 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 FOXN1O15353 648 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 ADORA1P30542 326 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 PHKA1P46020 1223 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 CRKP46108 304 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 TIMM10P62072 90 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 GRIK5Q16478 980 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 GORABQ5T7V8 394 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 MOB2Q70IA6 237 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 WDR66Q8TBY9 1149 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 TEKT1Q969V4 418 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 ZBED3Q96IU2 234 aaPredicted RBP10.13□□□□□ -0.79
SNX1-207ENST00000559401 YTHDC1Q96MU7 727 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms