RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SPON2Q9BUD6 331 aa17.23■□□□□ 0.35
CASC4-208ENST00000559151 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
CASC4-208ENST00000559151 TLR6Q9Y2C9 796 aa17.23■□□□□ 0.35
CASC4-208ENST00000559151 RLBP1P12271 317 aa17.22■□□□□ 0.35
CASC4-208ENST00000559151 GJA8P48165 433 aa17.22■□□□□ 0.35
CASC4-208ENST00000559151 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
CASC4-208ENST00000559151 CLEC4MQ9H2X3 399 aaPredicted RBP17.22■□□□□ 0.35
CASC4-208ENST00000559151 SOX13Q9UN79 622 aa17.22■□□□□ 0.35
CASC4-208ENST00000559151 IGF1RP08069 1367 aa17.21■□□□□ 0.35
CASC4-208ENST00000559151 PAGE1O75459 146 aa17.21■□□□□ 0.35
CASC4-208ENST00000559151 PHC3Q8NDX5 983 aa17.21■□□□□ 0.35
CASC4-208ENST00000559151 GMLQ99445 158 aa17.21■□□□□ 0.35
CASC4-208ENST00000559151 PTPRAP18433 802 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 ARID5AQ03989 594 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 RNFT1Q5M7Z0 435 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 PSAPL1Q6NUJ1 521 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 KIAA0825Q8IV33 1275 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 NPAS3Q8IXF0 933 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 GPRASP2Q96D09 838 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 RHOVQ96L33 236 aa17.2■□□□□ 0.34
CASC4-208ENST00000559151 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
CASC4-208ENST00000559151 ELOA3DA6NLF2 546 aaPredicted RBP17.19■□□□□ 0.34
CASC4-208ENST00000559151 EIF4A3P38919 411 aaKnown RBP17.19■□□□□ 0.34
CASC4-208ENST00000559151 ELOA3BQ3SY89 546 aa17.19■□□□□ 0.34
CASC4-208ENST00000559151 TTBK2Q6IQ55 1244 aa17.19■□□□□ 0.34
CASC4-208ENST00000559151 VN1R5Q7Z5H4 357 aa17.19■□□□□ 0.34
CASC4-208ENST00000559151 ELOA3Q8NG57 546 aa17.19■□□□□ 0.34
CASC4-208ENST00000559151 COL25A1Q9BXS0 654 aaPredicted RBP17.19■□□□□ 0.34
CASC4-208ENST00000559151 FRRS1LQ9P0K9 344 aa17.19■□□□□ 0.34
CASC4-208ENST00000559151 PCDH1Q08174 1060 aa17.18■□□□□ 0.34
CASC4-208ENST00000559151 ADAM19Q9H013 955 aa17.18■□□□□ 0.34
CASC4-208ENST00000559151 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
CASC4-208ENST00000559151 TMEM39AQ9NV64 488 aa17.17■□□□□ 0.34
CASC4-208ENST00000559151 VSIG8P0DPA2 414 aa17.16■□□□□ 0.34
CASC4-208ENST00000559151 ZNF423Q2M1K9 1284 aa17.16■□□□□ 0.34
CASC4-208ENST00000559151 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
CASC4-208ENST00000559151 PF4P02776 101 aa17.15■□□□□ 0.34
CASC4-208ENST00000559151 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
CASC4-208ENST00000559151 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
CASC4-208ENST00000559151 GDF6Q6KF10 455 aaPredicted RBP17.15■□□□□ 0.34
CASC4-208ENST00000559151 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
CASC4-208ENST00000559151 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
CASC4-208ENST00000559151 NUDT8Q8WV74 236 aa17.15■□□□□ 0.34
CASC4-208ENST00000559151 DHX38Q92620 1227 aaKnown RBP17.15■□□□□ 0.34
CASC4-208ENST00000559151 B3GALT4O96024 378 aa17.14■□□□□ 0.33
CASC4-208ENST00000559151 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
CASC4-208ENST00000559151 TFE3P19532 575 aaPredicted RBP17.13■□□□□ 0.33
CASC4-208ENST00000559151 GARTP22102 1010 aa17.13■□□□□ 0.33
CASC4-208ENST00000559151 AGMOQ6ZNB7 445 aa17.13■□□□□ 0.33
CASC4-208ENST00000559151 GOLGA6L1Q8N7Z2 621 aa17.13■□□□□ 0.33
CASC4-208ENST00000559151 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
CASC4-208ENST00000559151 EAF1Q96JC9 268 aaPredicted RBP17.13■□□□□ 0.33
CASC4-208ENST00000559151 ATF4P18848 351 aaPredicted RBP17.12■□□□□ 0.33
CASC4-208ENST00000559151 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
CASC4-208ENST00000559151 CAMK2GQ13555 558 aaPredicted RBP17.12■□□□□ 0.33
CASC4-208ENST00000559151 SLCO4C1Q6ZQN7 724 aa17.12■□□□□ 0.33
CASC4-208ENST00000559151 TTC9Q92623 222 aa17.12■□□□□ 0.33
CASC4-208ENST00000559151 STARD13Q9Y3M8 1113 aa17.12■□□□□ 0.33
CASC4-208ENST00000559151 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
CASC4-208ENST00000559151 RGS9O75916 674 aaPredicted RBP17.11■□□□□ 0.33
CASC4-208ENST00000559151 EPHA1P21709 976 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 ALAS2P22557 587 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 CDC27P30260 824 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.33
CASC4-208ENST00000559151 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 MCF2L2Q86YR7 1114 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 GDF2Q9UK05 429 aaPredicted RBP17.11■□□□□ 0.33
CASC4-208ENST00000559151 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
CASC4-208ENST00000559151 FGRP09769 529 aa17.1■□□□□ 0.33
CASC4-208ENST00000559151 ESRRAP11474 423 aaPredicted RBP17.1■□□□□ 0.33
CASC4-208ENST00000559151 LMNB2Q03252 620 aa17.1■□□□□ 0.33
CASC4-208ENST00000559151 SNAP47Q5SQN1 464 aa17.1■□□□□ 0.33
CASC4-208ENST00000559151 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
CASC4-208ENST00000559151 RPS26P62854 115 aaKnown RBP17.09■□□□□ 0.33
CASC4-208ENST00000559151 GOLM1Q8NBJ4 401 aa17.09■□□□□ 0.33
CASC4-208ENST00000559151 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
CASC4-208ENST00000559151 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
CASC4-208ENST00000559151 KRT76Q01546 638 aa17.08■□□□□ 0.32
CASC4-208ENST00000559151 GRIK5Q16478 980 aa17.08■□□□□ 0.32
CASC4-208ENST00000559151 STK35Q8TDR2 534 aa17.08■□□□□ 0.32
CASC4-208ENST00000559151 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.08■□□□□ 0.32
CASC4-208ENST00000559151 JPH1Q9HDC5 661 aaPredicted RBP17.08■□□□□ 0.32
CASC4-208ENST00000559151 TERTO14746 1132 aaKnown RBP17.07■□□□□ 0.32
CASC4-208ENST00000559151 EPXP11678 715 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 BMP6P22004 513 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 NME2P22392 152 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 SRSF11Q05519 484 aaKnown RBP17.07■□□□□ 0.32
CASC4-208ENST00000559151 IKBKEQ14164 716 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 SULF2Q8IWU5 870 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 NT5C1AQ9BXI3 368 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
CASC4-208ENST00000559151 GREM1O60565 184 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 CDC25BP30305 580 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 CABP4P57796 275 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 C1orf229Q6ZS94 237 aaPredicted RBP17.06■□□□□ 0.32
CASC4-208ENST00000559151 ACDQ96AP0 544 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
CASC4-208ENST00000559151 ALBP02768 609 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms