RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 KDM4CQ9H3R0 1056 aa9.3□□□□□ -0.92
AC090888.3-201ENST00000558917 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
AC090888.3-201ENST00000558917 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 TRIOBPQ9H2D6 2365 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 DICER1Q9UPY3 1922 aaKnown RBP9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 AOC2O75106 756 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 IRS1P35568 1242 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 PTGIRP43119 386 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 MARSP56192 900 aaKnown RBP9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 CYP4F22Q6NT55 531 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 NME9Q86XW9 330 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 TAF1DQ9H5J8 278 aaPredicted RBP9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 PARP3Q9Y6F1 533 aa9.29□□□□□ -0.92
AC090888.3-201ENST00000558917 LILRA1O75019 489 aa9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 DCAF11Q8TEB1 546 aa9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 IP6K1Q92551 441 aa9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 GPR101Q96P66 508 aaPredicted RBP9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 RANBP2P49792 3224 aaKnown RBP9.28□□□□□ -0.92
AC090888.3-201ENST00000558917 MYH14Q7Z406 1995 aaKnown RBP9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 CYP27B1O15528 508 aa9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 ARHGEF15O94989 841 aa9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 USP17L8P0C7I0 530 aa9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 SMARCC1Q92922 1105 aaPredicted RBP9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 SRP68Q9UHB9 627 aaKnown RBP9.27□□□□□ -0.93
AC090888.3-201ENST00000558917 TRAPPC3LQ5T215 181 aa9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 MAP1SQ66K74 1059 aaPredicted RBP9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 KDF1Q8NAX2 398 aaPredicted RBP9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
AC090888.3-201ENST00000558917 BRCA2P51587 3418 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 DLEC1Q9Y238 1755 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 FBLN1P23142 703 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 GRM1Q13255 1194 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 NBPF6Q5VWK0 638 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 NBPF4Q96M43 638 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
AC090888.3-201ENST00000558917 KDRP35968 1356 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 CEP290O15078 2479 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 FER1L6Q2WGJ9 1857 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 ESPNB1AK53 854 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 RHOQP17081 205 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 MAP3K10Q02779 954 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 SRSF11Q05519 484 aaKnown RBP9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 LYPD4Q6UWN0 246 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 CNTROBQ8N137 903 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 ZIC5Q96T25 663 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 CENPJQ9HC77 1338 aaPredicted RBP9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 HTTP42858 3142 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 SCN4AP35499 1836 aa9.24□□□□□ -0.93
AC090888.3-201ENST00000558917 CD163L1Q9NR16 1453 aa9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 HMGB2P26583 209 aaKnown RBP9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 CST9Q5W186 159 aa9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 SCARF2Q96GP6 870 aaPredicted RBP9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 DNMT3AQ9Y6K1 912 aaPredicted RBP9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 KTN1Q86UP2 1357 aaKnown RBP9.23□□□□□ -0.93
AC090888.3-201ENST00000558917 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 TM4SF1P30408 202 aa9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 RFC5P40937 340 aa9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 UNC80Q8N2C7 3258 aa9.22□□□□□ -0.93
AC090888.3-201ENST00000558917 HOXC9P31274 260 aa9.21□□□□□ -0.94
AC090888.3-201ENST00000558917 KANK3Q6NY19 840 aa9.21□□□□□ -0.94
AC090888.3-201ENST00000558917 TTLL6Q8N841 843 aa9.21□□□□□ -0.94
AC090888.3-201ENST00000558917 ATG3Q9NT62 314 aa9.21□□□□□ -0.94
AC090888.3-201ENST00000558917 CARMIL3Q8ND23 1372 aa9.21□□□□□ -0.94
AC090888.3-201ENST00000558917 NRXN2Q9P2S2 1712 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 MEN1O00255 615 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 RPS6KA4O75676 772 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 RFC4P35249 363 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 MAP2K2P36507 400 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 ECE1P42892 770 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 RNF144AP50876 292 aaPredicted RBP9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 GAS6Q14393 721 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 CENPFP49454 3210 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 MAP3K19Q56UN5 1328 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 PCDH11XQ9BZA7 1347 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 PCDH11YQ9BZA8 1340 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
AC090888.3-201ENST00000558917 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms